RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 RAB8BQ92930 207 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 POP5Q969H6 163 aaKnown RBP2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 PPCDCQ96CD2 204 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 TVP23CQ96ET8 276 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 SLC22A4Q9H015 551 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 GABARAPL1Q9H0R8 117 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 MS4A6AQ9H2W1 248 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 DUSP21Q9H596 190 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 COMMD9Q9P000 198 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 PCLOQ9Y6V0 5065 aa2.49□□□□□ -2.01
PRPF38A-203ENST00000487160 A0A0B4J2C4 111 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 A0A1W2PQD3 144 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 H0Y980 276 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 C15orf65H3BRN8 121 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 PDYNP01213 254 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 IGHMP01871 453 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 CRYBA1P05813 215 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 CGB3P0DN86 165 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 CGB7P0DN87 165 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 GABRA3P34903 492 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 CBX5P45973 191 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 CCL8P80075 99 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 DCXRQ7Z4W1 244 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 LRP11Q86VZ4 500 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 ZNF664Q8N3J9 261 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 OR11L1Q8NGX0 322 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 PIGXQ8TBF5 258 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 STAG3L4Q8TBR4 150 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 GPR119Q8TDV5 335 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 RNF133Q8WVZ7 376 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 ITFG2Q969R8 447 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 CDCA4Q9BXL8 241 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 UBQLN4Q9NRR5 601 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 ZNF391Q9UJN7 358 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 POMPQ9Y244 141 aa2.48□□□□□ -2.01
PRPF38A-203ENST00000487160 IGHV1-69-2A0A0G2JMI3 117 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 GNG14A0A1W2PPG7 69 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 CLDN25C9JDP6 229 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 TRAPPC2LH3BP13 241 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 K7EIL1 84 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 IGLV6-57P01721 117 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 PYCR1P32322 319 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 HAAOP46952 286 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 EVX1P49640 407 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 RGS21Q2M5E4 152 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 DEFB112Q30KQ8 113 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 AMMECR1LQ6DCA0 310 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 LAIR2Q6ISS4 152 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 BRD3OSQ6XYD6 125 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 TMPPEQ6ZT21 453 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 OLIG3Q7RTU3 272 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 MMGT1Q8N4V1 131 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 CDC26Q8NHZ8 85 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 ZHX1-C8orf76Q96EF9 292 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 KCTD7Q96MP8 289 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 USE1Q9NZ43 259 aa2.47□□□□□ -2.01
PRPF38A-203ENST00000487160 LCE6AA0A183 80 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 METTL15A6NJ78 407 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 C3orf84H3BNL1 204 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 IGKV4-1P06312 121 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 P0C880 135 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 CBR1P16152 277 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 AKR1C4P17516 323 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 ATF1P18846 271 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 IFNGR2P38484 337 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 BLVRAP53004 296 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 FOXA1P55317 472 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 ACTBP60709 375 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 H3F3AP84243 136 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 CASP8Q14790 479 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 DEFB121Q5J5C9 76 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 SPIN3Q5JUX0 258 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 SPATA31B1PQ5VZV4 182 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 RPS27LQ71UM5 84 aaKnown RBP2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 AAED1Q7RTV5 226 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 C3orf22Q8N5N4 141 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 HAVCR2Q8TDQ0 301 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 C16orf78Q8WTQ4 265 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 MAGOHBQ96A72 148 aaKnown RBP2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 CHMP6Q96FZ7 201 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 TSPAN32Q96QS1 320 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 TM2D3Q9BRN9 247 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 TSSK6Q9BXA6 273 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 ARL6Q9H0F7 186 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 VPS29Q9UBQ0 182 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 PCTPQ9UKL6 214 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 GUCA1BQ9UMX6 200 aa2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 DYNC2H1Q8NCM8 4307 aaKnown RBP2.46□□□□□ -2.02
PRPF38A-203ENST00000487160 DSPPQ9NZW4 1301 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 CXCR6O00574 342 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 SOX14O95416 240 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 IGHV3-53P01767 116 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 IFI6P09912 130 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 OCM2P0CE71 109 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 GLRXP35754 106 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 MP68P56378 58 aa2.45□□□□□ -2.02
PRPF38A-203ENST00000487160 GLO1Q04760 184 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms