RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 REG1AP05451 166 aa6.32□□□□□ -1.4
COL6A4P1-202ENST00000487147 CD69Q07108 199 aa6.32□□□□□ -1.4
COL6A4P1-202ENST00000487147 HES1Q14469 280 aa6.32□□□□□ -1.4
COL6A4P1-202ENST00000487147 OR2K2Q8NGT1 345 aa6.32□□□□□ -1.4
COL6A4P1-202ENST00000487147 SLC25A33Q9BSK2 321 aa6.32□□□□□ -1.4
COL6A4P1-202ENST00000487147 MS4A6AQ9H2W1 248 aa6.32□□□□□ -1.4
COL6A4P1-202ENST00000487147 SEC11AP67812 179 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 VWC2Q2TAL6 325 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 BHLHA15Q7RTS1 189 aaPredicted RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 ATP6V0BQ99437 205 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 SIGMAR1Q99720 223 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 PLSCR4Q9NRQ2 329 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 EPDR1Q9UM22 224 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 UPK2O00526 184 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 CD5LO43866 347 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 CKS2P33552 79 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 RAB9AP51151 201 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 PRCDQ00LT1 54 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 CDX2Q99626 313 aaPredicted RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 MCRIP2Q9BUT9 160 aaKnown RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 GTF3C1Q12789 2109 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 ESDP10768 282 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 MYOD1P15172 320 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 TM4SF20Q53R12 229 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 PMS2CLQ68D20 193 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 SPACA3Q8IXA5 215 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 NAA38Q9BRA0 125 aaKnown RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 JKAMPQ9P055 326 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 FOXA2Q9Y261 457 aaPredicted RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 CNOT1A5YKK6 2376 aaKnown RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 ZNF503-AS2A6NEH8 195 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 SH2D7A6NKC9 451 aaPredicted RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 PMS2P5A8MQ11 134 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 C21orf140B9A014 251 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 FRMD6-AS1P0C7T7 363 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 VDAC2P45880 294 aaPredicted RBP6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 FAM201AQ5SY85 155 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 ZNF414Q96IQ9 312 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 TRIOBPQ9H2D6 2365 aa6.31□□□□□ -1.4
COL6A4P1-202ENST00000487147 KBTBD11-OT1A0A1B0GTJ5 212 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 GGTLC3B5MD39 225 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 OR2J3O76001 311 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 IGHV1-2P23083 117 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 RPL27AP46776 148 aaKnown RBP6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 ODF1Q14990 250 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 PEAR1Q5VY43 1037 aaPredicted RBP6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 TDHQ8IZJ6 230 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 MAFAQ8NHW3 353 aaPredicted RBP6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 CCL17Q92583 94 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 PTPRZ1P23471 2315 aaPredicted RBP6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 IGHV2-70DA0A0C4DH43 119 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 CECR9P0C854 216 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 SMIM13P0DJ93 91 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 SAA1P0DJI8 122 aaPredicted RBP6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 Q6ZT83 130 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 OR4C13Q8NGP0 309 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 OSR1Q8TAX0 266 aaPredicted RBP6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 PRR7Q8TB68 274 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 SCNM1Q9BWG6 230 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 IGHV3-72A0A0B4J1Y9 119 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 TRAV17A0A0B4J275 112 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 IGLC7A0M8Q6 106 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 TMEM189A5PLL7 270 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 K7EP13 123 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 PAX1P15863 534 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 ZNF138P52744 262 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 PSG9Q00887 426 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 WDR86Q86TI4 376 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 FMC1Q96HJ9 113 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 GTSF1LQ9H1H1 148 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 POLEQ07864 2286 aa6.3□□□□□ -1.4
COL6A4P1-202ENST00000487147 PKDREJQ9NTG1 2253 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 SMIM27A0A1W2PRY6 76 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 IGLV2-14P01704 120 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 CRYBA4P53673 196 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 ERVK11-1P61568 191 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 MLANAQ16655 118 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 KRTAP27-1Q3LI81 207 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 C5orf30Q96GV9 206 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 DKK1O94907 266 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 ORM1P02763 201 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 TMUB1Q9BVT8 246 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 GP6Q9HCN6 339 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 CACNA1GO43497 2377 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 TRAV26-1A0A087WT03 109 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 Q0VFX4 171 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 TWIST1Q15672 202 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 ASPHD1Q5U4P2 390 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 CD177Q8N6Q3 437 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 ZNF714Q96N38 554 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 Q9H3A6 140 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 PILRBQ9UKJ0 227 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 ZNF257Q9Y2Q1 563 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 GPR179Q6PRD1 2367 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 A0A1W2PRD5 423 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 A0A1W2PRF3 423 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 A0A1W2PRM7 423 aa6.29□□□□□ -1.4
COL6A4P1-202ENST00000487147 CCL8P80075 99 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms