RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SLC35A3Q9Y2D2 325 aa1.52□□□□□ -2.17
SMC4-218ENST00000486711 C7orf71A4D174 169 aa1.51□□□□□ -2.17
SMC4-218ENST00000486711 CYB5BO43169 146 aa1.51□□□□□ -2.17
SMC4-218ENST00000486711 LYNX1P0DP58 116 aa1.51□□□□□ -2.17
SMC4-218ENST00000486711 HIST1H2BLQ99880 126 aa1.51□□□□□ -2.17
SMC4-218ENST00000486711 RNF122Q9H9V4 155 aa1.51□□□□□ -2.17
SMC4-218ENST00000486711 CCDC88CQ9P219 2028 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 DOCK5Q9H7D0 1870 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 ZFHX2Q9C0A1 2572 aaPredicted RBP1.5□□□□□ -2.17
SMC4-218ENST00000486711 PROSCO94903 275 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 CST2P09228 141 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 DEFA3P59666 94 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 LINC00311Q8N616 119 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 C15orf53Q8NAA6 179 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 OR11H6Q8NGC7 330 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 OR13D1Q8NGV5 346 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 OR4C6Q8NH72 309 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 C9orf16Q9BUW7 83 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 OPTCQ9UBM4 332 aa1.5□□□□□ -2.17
SMC4-218ENST00000486711 HECW1Q76N89 1606 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 TRAV1-1A0A0B4J248 108 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 SULT1B1O43704 296 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 UBL3O95164 117 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 MGST1P10620 155 aaKnown RBP1.49□□□□□ -2.17
SMC4-218ENST00000486711 MIFP14174 115 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 EIF5AP63241 154 aaKnown RBP1.49□□□□□ -2.17
SMC4-218ENST00000486711 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.49□□□□□ -2.17
SMC4-218ENST00000486711 CEP19Q96LK0 163 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 PARVBQ9HBI1 364 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 ARL5AQ9Y689 179 aa1.49□□□□□ -2.17
SMC4-218ENST00000486711 FAM159BA6NKW6 160 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 CLDN25C9JDP6 229 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 OR2T1O43869 369 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 OR1I1O60431 355 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 SRP14P37108 136 aaKnown RBP1.48□□□□□ -2.17
SMC4-218ENST00000486711 BASP1P80723 227 aaKnown RBP1.48□□□□□ -2.17
SMC4-218ENST00000486711 RHOGP84095 191 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 TSNQ15631 228 aaKnown RBP1.48□□□□□ -2.17
SMC4-218ENST00000486711 RNASE10Q5GAN6 216 aaKnown RBP1.48□□□□□ -2.17
SMC4-218ENST00000486711 OR10X1Q8NGY0 326 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 OR2T10Q8NGZ9 312 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 WFDC5Q8TCV5 224 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 RETNLBQ9BQ08 111 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 UTP11Q9Y3A2 253 aaKnown RBP1.48□□□□□ -2.17
SMC4-218ENST00000486711 HEATR5AQ86XA9 2040 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 MYH11P35749 1972 aa1.48□□□□□ -2.17
SMC4-218ENST00000486711 HMGB3O15347 200 aaKnown RBP1.47□□□□□ -2.17
SMC4-218ENST00000486711 RNASE3P12724 160 aaKnown RBP1.47□□□□□ -2.17
SMC4-218ENST00000486711 HOXA6P31267 233 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 SSR2P43308 183 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 CAPZBP47756 277 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 SERPINB9P50453 376 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 PIGPP57054 158 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 RAB4BP61018 213 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 BRMS1LQ5PSV4 323 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 GOLT1AQ6ZVE7 132 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 PSTPIP2Q9H939 334 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 HS3ST2Q9Y278 367 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 SDK1Q7Z5N4 2213 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 FREM1Q5H8C1 2179 aa1.47□□□□□ -2.17
SMC4-218ENST00000486711 CCDC88AQ3V6T2 1871 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 TRBV19A0A075B6N1 114 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 IGKV2D-26A0A0A0MRZ7 120 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 TRAV4A0A0B4J268 109 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 C2orf70A6NJV1 201 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 HCRTO43612 131 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 IFNA7P01567 189 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 ARF6P62330 175 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 KRR1Q13601 381 aaKnown RBP1.46□□□□□ -2.18
SMC4-218ENST00000486711 S100A7AQ86SG5 101 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 TEX47Q8TBZ9 253 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 SFT2D1Q8WV19 159 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 IMUPQ9GZP8 106 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 ARMC1Q9NVT9 282 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 FMN1Q68DA7 1419 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 ADGRL3Q9HAR2 1447 aa1.46□□□□□ -2.18
SMC4-218ENST00000486711 BAZ2BQ9UIF8 2168 aaKnown RBP1.45□□□□□ -2.18
SMC4-218ENST00000486711 TRAV3A0A0B4J244 114 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 HYPMO75409 117 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 SRIP30626 198 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 PDE6HQ13956 83 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 TAF1AQ15573 450 aaPredicted RBP1.45□□□□□ -2.18
SMC4-218ENST00000486711 ESRGQ1W209 222 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 OR10J5Q8NHC4 309 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 ADAT3Q96EY9 351 aaPredicted RBP1.45□□□□□ -2.18
SMC4-218ENST00000486711 YPEL2Q96QA6 119 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 C6orf62Q9GZU0 229 aaPredicted RBP1.45□□□□□ -2.18
SMC4-218ENST00000486711 KLK9Q9UKQ9 250 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 MED1Q15648 1581 aaPredicted RBP1.45□□□□□ -2.18
SMC4-218ENST00000486711 TENM1Q9UKZ4 2725 aa1.45□□□□□ -2.18
SMC4-218ENST00000486711 RP1L1Q8IWN7 2480 aaPredicted RBP1.44□□□□□ -2.18
SMC4-218ENST00000486711 BRWD1Q9NSI6 2320 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 A0A087WX48 190 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 IGKV1-9A0A0C4DH69 117 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 ATP5G3P48201 142 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 HSPE1P61604 102 aaKnown RBP1.44□□□□□ -2.18
SMC4-218ENST00000486711 RRN3P1Q2M238 152 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 BCL2L15Q5TBC7 163 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 LINC00301Q8NCQ3 95 aa1.44□□□□□ -2.18
SMC4-218ENST00000486711 PXT1Q8NFP0 134 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms