RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 RPRMQ9NS64 109 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 SLC39A9Q9NUM3 307 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 WDR83OSQ9Y284 106 aa8.89□□□□□ -0.99
SND1-212ENST00000485871 NPIPB5A8MRT5 1133 aa8.88□□□□□ -0.99
SND1-212ENST00000485871 ATRAIDQ6UW56 229 aa8.88□□□□□ -0.99
SND1-212ENST00000485871 SLC35E3Q7Z769 313 aa8.88□□□□□ -0.99
SND1-212ENST00000485871 TTC9CQ8N5M4 171 aa8.88□□□□□ -0.99
SND1-212ENST00000485871 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
SND1-212ENST00000485871 RCC1LQ96I51 464 aaKnown RBP8.88□□□□□ -0.99
SND1-212ENST00000485871 MANBALQ9NQG1 85 aa8.88□□□□□ -0.99
SND1-212ENST00000485871 SMCO4Q9NRQ5 59 aa8.88□□□□□ -0.99
SND1-212ENST00000485871 F11RQ9Y624 299 aaKnown RBP8.88□□□□□ -0.99
SND1-212ENST00000485871 LOC102723971A0A1B0GUV8 181 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 MAP1LC3B2A6NCE7 125 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 G3V318 75 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 TSPAN4O14817 238 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 IFNA4P05014 189 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 RNASE1P07998 156 aaKnown RBP8.87□□□□□ -0.99
SND1-212ENST00000485871 BCL2P10415 239 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 PPIFP30405 207 aaKnown RBP8.87□□□□□ -0.99
SND1-212ENST00000485871 OPRK1P41145 380 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 CFHR3Q02985 330 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 FFAR4Q5NUL3 377 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 OR1P1Q8NH06 330 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 FAM110DQ8TAY7 271 aaPredicted RBP8.87□□□□□ -0.99
SND1-212ENST00000485871 ZNF418Q8TF45 676 aaPredicted RBP8.87□□□□□ -0.99
SND1-212ENST00000485871 ABHD5Q8WTS1 349 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 TMEM68Q96MH6 324 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 FANCD2OSQ96PS1 177 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 NPFFR1Q9GZQ6 430 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 MAP1LC3BQ9GZQ8 125 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 TUBA4BQ9H853 241 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 NPVFQ9HCQ7 196 aa8.87□□□□□ -0.99
SND1-212ENST00000485871 IGLV11-55A0A075B6I3 123 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 SEC14L6B5MCN3 397 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 C9JQL5 133 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 SRP19P09132 144 aaKnown RBP8.86□□□□□ -0.99
SND1-212ENST00000485871 SUB1P53999 127 aaKnown RBP eCLIP8.86□□□□□ -0.991e-323■■■■■ 31.9
SND1-212ENST00000485871 ICAM4Q14773 271 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 TMEM95Q3KNT9 176 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 UNQ5815/PRO19632Q6UWF5 114 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 OR10G9Q8NGN4 311 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 OR10G7Q8NGN6 311 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 WNT10AQ9GZT5 417 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 FNDC4Q9H6D8 234 aaPredicted RBP8.86□□□□□ -0.99
SND1-212ENST00000485871 VAX2Q9UIW0 290 aa8.86□□□□□ -0.99
SND1-212ENST00000485871 TRAV41A0A0B4J266 112 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 SMCO3A2RU48 225 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 FAM181BA6NEQ2 426 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 B4DEV8 164 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 AP4M1O00189 453 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 BRI3O95415 125 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 NPBWR1P48145 328 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 PSMB3P49720 205 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 ELLP55199 621 aaPredicted RBP8.85□□□□□ -0.99
SND1-212ENST00000485871 RPL15P61313 204 aaKnown RBP8.85□□□□□ -0.99
SND1-212ENST00000485871 CD69Q07108 199 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 PNRC1Q12796 327 aaPredicted RBP8.85□□□□□ -0.99
SND1-212ENST00000485871 HAGHQ16775 308 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 ECSCRQ19T08 205 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 C9orf152Q5JTZ5 239 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 Q6ZSV7 163 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 C15orf54Q8N8G6 183 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 RNASEH2CQ8TDP1 164 aaKnown RBP8.85□□□□□ -0.99
SND1-212ENST00000485871 CACNG8Q8WXS5 425 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 NOL4LQ96MY1 436 aaPredicted RBP8.85□□□□□ -0.99
SND1-212ENST00000485871 TXNDC17Q9BRA2 123 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 NIPSNAP3BQ9BS92 247 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 PRSS22Q9GZN4 317 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 SERTAD4Q9NUC0 356 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 GNG13Q9P2W3 67 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 RFNGQ9Y644 331 aa8.85□□□□□ -0.99
SND1-212ENST00000485871 TRBV9A0A0B4J1U6 114 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 FAM74A7A6NL05 159 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 I3L2K1 104 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 K7EIM0 57 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 M0R036 132 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 GPX4P36969 197 aaPredicted RBP8.84□□□□□ -0.99
SND1-212ENST00000485871 CDC34P49427 236 aaPredicted RBP8.84□□□□□ -0.99
SND1-212ENST00000485871 CCL20P78556 96 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 ZNF726P1Q15940 193 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 MLANAQ16655 118 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 FAM74A3Q4VXF1 159 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 ARSJQ5FYB0 599 aaPredicted RBP8.84□□□□□ -0.99
SND1-212ENST00000485871 ACSM6Q6P461 480 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 TEPPQ6URK8 271 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 LCN15Q6UWW0 184 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 TREML4Q6UXN2 200 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 RPP25LQ8N5L8 163 aaKnown RBP8.84□□□□□ -0.99
SND1-212ENST00000485871 OR5T1Q8NG75 326 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 C19orf24Q9BVV8 132 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 MRPL36Q9P0J6 103 aaKnown RBP8.84□□□□□ -0.99
SND1-212ENST00000485871 LINC00527Q9UJ94 153 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 PRELID1Q9Y255 219 aa8.84□□□□□ -0.99
SND1-212ENST00000485871 A0A087WWC5 75 aa8.83□□□□□ -1
SND1-212ENST00000485871 A0A1B0GV50 99 aa8.83□□□□□ -1
SND1-212ENST00000485871 A0A1W2PPV4 95 aa8.83□□□□□ -1
SND1-212ENST00000485871 TMEM250H0YL14 139 aa8.83□□□□□ -1
SND1-212ENST00000485871 CORTO00230 105 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms