RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 FNDC10F2Z333 226 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 G3V3Q6 166 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 K7EIM0 57 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 NDUFB8O95169 186 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 MT-CO2P00403 227 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 FCGR2BP31994 310 aaPredicted RBP12.64□□□□□ -0.39
TRIM54-203ENST00000485306 OPRK1P41145 380 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 HBG1P69891 147 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 HBG2P69892 147 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 HAPLN4Q86UW8 402 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 EEF1AKMT3Q96AZ1 226 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 PINX1Q96BK5 328 aaKnown RBP12.64□□□□□ -0.39
TRIM54-203ENST00000485306 TXN2Q99757 166 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 GAR1Q9NY12 217 aaKnown RBP12.64□□□□□ -0.39
TRIM54-203ENST00000485306 SIGLEC8Q9NYZ4 499 aa12.64□□□□□ -0.39
TRIM54-203ENST00000485306 FXYD6-FXYD2A0A087WZ82 144 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 TRBV7-1A0A0A6YYK4 115 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 PMS2P5A8MQ11 134 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 HMSDA8MTL9 139 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 METTL15P1P0C7V9 234 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 RPL12P30050 165 aaKnown RBP12.63□□□□□ -0.39
TRIM54-203ENST00000485306 S100A11P31949 105 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 IL34Q6ZMJ4 242 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 ZNF546Q86UE3 836 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 INO80EQ8NBZ0 244 aaPredicted RBP12.63□□□□□ -0.39
TRIM54-203ENST00000485306 AQP10Q96PS8 301 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 NEURL2Q9BR09 285 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 C21orf62Q9NYP8 219 aa12.63□□□□□ -0.39
TRIM54-203ENST00000485306 IGSF23A1L1A6 192 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 PRSS46E5RG02 174 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 BMPR1BO00238 502 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 GGCTO75223 188 aaKnown RBP12.62□□□□□ -0.39
TRIM54-203ENST00000485306 C1QBP02746 253 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 CSN3P07498 182 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 FRMD6-AS1P0C7T7 363 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 MFAP4P55083 255 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 DLK1P80370 383 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 EWSR1Q01844 656 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRIM54-203ENST00000485306 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 LCN12Q6JVE5 192 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 SLC16A13Q7RTY0 426 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 SCARB1Q8WTV0 552 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 SLC35E1Q96K37 410 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 TNFSF18Q9UNG2 199 aa12.62□□□□□ -0.39
TRIM54-203ENST00000485306 PFDN1O60925 122 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 SCGB2A1O75556 95 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 NPBWR1P48145 328 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 OR8G2PQ6IF36 304 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 SBSPONQ8IVN8 264 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 TMEM116Q8NCL8 245 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 OR2K2Q8NGT1 345 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 ZNF502Q8TBZ5 544 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 FNDC4Q9H6D8 234 aaPredicted RBP12.61□□□□□ -0.39
TRIM54-203ENST00000485306 ZMAT4Q9H898 229 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 HSPB11Q9Y547 144 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 DNAH9Q9NYC9 4486 aa12.61□□□□□ -0.39
TRIM54-203ENST00000485306 MFSD2BA6NFX1 497 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 PPP5D1E7EU14 171 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 CST7O76096 145 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 IGHV3-23P01764 117 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 SLC38A11Q08AI6 406 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 ACOT7LQ6ZUV0 252 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 GTSCR1Q86UQ5 136 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 Q8N1Y9 231 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 OR1S2Q8NGQ3 325 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 CCDC140Q96MF4 163 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 S4R3C0 116 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
TRIM54-203ENST00000485306 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 DFFBO76075 338 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 IGHV4-30-4P0DP06 118 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 ARL3P36405 182 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 ARL16Q0P5N6 197 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 OR2F1Q13607 317 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 ZNF345Q14585 488 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 FAM106AQ4KMX7 169 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 CLEC19AQ6UXS0 136 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 TMEM217Q8N7C4 229 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 TMEM147Q9BVK8 224 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 MFFQ9GZY8 342 aa12.59□□□□□ -0.39
TRIM54-203ENST00000485306 A8MZ25 164 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 LGALS9O00182 355 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 ARPC5O15511 151 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 CLN5O75503 358 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 OR2C1O95371 312 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 NHLH2Q02577 135 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 GAMTQ14353 236 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 ZFP69Q49AA0 526 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 GPHB5Q86YW7 130 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 LILRB2Q8N423 598 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 OR11H4Q8NGC9 324 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 OR5C1Q8NGR4 320 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 DYNLRB2Q8TF09 96 aa12.58□□□□□ -0.4
TRIM54-203ENST00000485306 BSCL2Q96G97 398 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms