RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 GINS4Q9BRT9 223 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 TIPINQ9BVW5 301 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 HES4Q9HCC6 221 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 TMEM138Q9NPI0 162 aa-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 MRM2Q9UI43 246 aaKnown RBP-1.05□□□□□ -2.58
NCKAP1-204ENST00000477988 RIMBP3CA6NJZ7 1639 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 RIMBP3BA6NNM3 1639 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 RIMBP3Q9UFD9 1639 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 TRAV23DV6A0A075B6W5 121 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 TCRBV4S1A1TA0A5B7 111 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 DISC1C4P0D8 188 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 F5H768 121 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 GPR31O00270 319 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 SULT1C2O00338 296 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 DHFRP00374 187 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 SLC35E2BP0CK96 405 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 COX7CP15954 63 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST1H2BOP23527 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST1H2BBP33778 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST1H2BDP58876 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 FXYD4P59646 89 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 RPL37AP61513 92 aaKnown RBP-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST1H2BCP62807 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST2H2BEQ16778 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HSP90AA4PQ58FG1 418 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST2H2BFQ5QNW6 126 aaPredicted RBP-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 DPPA3Q6W0C5 159 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 PLEKHG7Q6ZR37 379 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 RIBC1Q8N443 379 aaPredicted RBP-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 PDCL2Q8N4E4 241 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 OR13D1Q8NGV5 346 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 MCFD2Q8NI22 146 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 TMEM254Q8TBM7 123 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 RNASEH2CQ8TDP1 164 aaKnown RBP-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST1H2BHQ93079 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 CYTH2Q99418 400 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST1H2BNQ99877 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST1H2BMQ99879 126 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 ASCL3Q9NQ33 180 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 ENPP5Q9UJA9 477 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 TP53TG1Q9Y2A0 90 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 SLC35A3Q9Y2D2 325 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 PXMP4Q9Y6I8 212 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 MED13LQ71F56 2210 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 RNF213Q63HN8 5207 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 PKDREJQ9NTG1 2253 aa-1.06□□□□□ -2.58
NCKAP1-204ENST00000477988 BIVM-ERCC5R4GMW8 1640 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 SPTA1P02549 2419 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 ITPR3Q14573 2671 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 TTC41PQ6P2S7 1318 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 TRAV9-1A0A075B6T8 112 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 PQLC2LA1A4F0 135 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 F8W1H4 67 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 BUB1B-PAK6H3BSN5 160 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 TNFAIP8O95379 198 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 CASP1P29466 404 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 DDTP30046 118 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 ETV6P41212 452 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 MAP2K4P45985 399 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 CDC42P60953 191 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 IFITM2Q01629 132 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 STK38Q15208 465 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 HLA-DRB5Q30154 266 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 BRMS1LQ5PSV4 323 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 GLYATL3Q5SZD4 288 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 FAM78BQ5VT40 261 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 C2orf82Q6UX34 121 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 PATE2Q6UY27 113 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 BPIFA4PQ86YQ2 179 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 IQCF2Q8IXL9 164 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 Q8IYB0 196 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 HIST3H2BBQ8N257 126 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 JOSD2Q8TAC2 188 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 Q8TAT8 98 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 RMND5BQ96G75 393 aaPredicted RBP-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 TP53RKQ96S44 253 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 HDHD2Q9H0R4 259 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 NHP2Q9NX24 153 aaKnown RBP-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 IDI2-AS1Q9NZ38 188 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 POLR1DQ9Y2S0 133 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 MYH10P35580 1976 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 NEO1Q92859 1461 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 DNAH3Q8TD57 4116 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 DCCP43146 1447 aa-1.07□□□□□ -2.58
NCKAP1-204ENST00000477988 GOLGA8MH3BSY2 632 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 CYB5BO43169 146 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 TIMM17BO60830 172 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 ADAP1O75689 374 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 KCNE1P15382 129 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 CAV3P56539 151 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 CAV1Q03135 178 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 OCIAD2Q56VL3 154 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 RBM48Q5RL73 367 aaKnown RBP-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 RPL22L1Q6P5R6 122 aaKnown RBP-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 Q6ZS49 121 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 TEN1Q86WV5 123 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 OR13C4Q8NGS5 318 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 MRPL30Q8TCC3 161 aaKnown RBP-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 MUCL1Q96DR8 90 aa-1.08□□□□□ -2.58
NCKAP1-204ENST00000477988 SERPINB11Q96P15 392 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms