RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RPS10-NUDT3A0A1W2PQS6 291 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 H3BMM0 161 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 ATG12O94817 140 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 PI3P19957 117 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 VAMP1P23763 118 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 RND2P52198 227 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 DEFB1P60022 68 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 DAD1P61803 113 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 NEDD8Q15843 81 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 RNF212Q495C1 297 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 GDF5OSQ5U4N7 250 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 C16orf54Q6UWD8 224 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 SNX29P2Q8IUI4 249 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 CADM3Q8N126 398 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 OR1S2Q8NGQ3 325 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 OR4X1Q8NH49 305 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 RRNAD1Q96FB5 475 aaKnown RBP4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 ACY3Q96HD9 319 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM210BQ96KR6 192 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 TMEM208Q9BTX3 173 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 PBDC1Q9BVG4 233 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 FNDC4Q9H6D8 234 aaPredicted RBP4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 HEYLQ9NQ87 328 aaPredicted RBP4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 DKK2Q9UBU2 259 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 GOLT1BQ9Y3E0 138 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 YTHDF2Q9Y5A9 579 aaKnown RBP4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 DNAH6Q9C0G6 4158 aa4.76□□□□□ -1.65
RTFDC1-206ENST00000477485 RYR1P21817 5038 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 SMIM9A6NGZ8 99 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 M0QYG6 137 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 GSTZ1O43708 216 aaPredicted RBP4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 CDK2AP2O75956 126 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 NXPH3O95157 252 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 NUDT3O95989 172 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 IGKV1-5P01602 117 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 HBE1P02100 147 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 HLA-DRB4P13762 266 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 OR10J1P30954 320 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 RCVRNP35243 200 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 TGFBR1P36897 503 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 ID1P41134 155 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 PIGPP57054 158 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 DHODHQ02127 395 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 USF2Q15853 346 aaPredicted RBP4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 SP6Q3SY56 376 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 GSG1LQ6UXU4 331 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 ZNF705AQ6ZN79 300 aaPredicted RBP4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 C6orf223Q8N319 242 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 GLMPQ8WWB7 406 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 PPP1R14BQ96C90 147 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 TP53RKQ96S44 253 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 YTHDF1Q9BYJ9 559 aaKnown RBP4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 MAGT1Q9H0U3 335 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 SCRT2Q9NQ03 307 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM212BQ9NTI7 297 aaPredicted RBP4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 HLA-DRB4X5D2U9 266 aa4.75□□□□□ -1.65
RTFDC1-206ENST00000477485 A0A0B4J293 547 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 C3orf85A0A1B0GTC6 90 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 SMIM31A0A1B0GVY4 71 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 CEBPZOSA8MTT3 80 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 ZNF705FA8MVS1 300 aaPredicted RBP4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 IGKV1-17P01599 117 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 IGLC1P0CG04 106 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 ZNF705DP0CH99 300 aaPredicted RBP4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 ZNF705BP0CI00 300 aaPredicted RBP4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 NAT1P18440 290 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 HTR2BP41595 481 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 RORCP51449 518 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 LSM3P62310 102 aaKnown RBP4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 RRN3P1Q2M238 152 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 EBLN2Q6P2I7 272 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 LYSMD2Q8IV50 215 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 CROCCP3Q8IVE0 287 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 NEU1Q99519 415 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 SLC35B3Q9H1N7 401 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 SAV1Q9H4B6 383 aaPredicted RBP4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 COPZ2Q9P299 210 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 COMMD3Q9UBI1 195 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 RAB26Q9ULW5 256 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 ANAPC10Q9UM13 185 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 VPS13DQ5THJ4 4388 aa4.74□□□□□ -1.65
RTFDC1-206ENST00000477485 A0A0G2JRQ6 117 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 NBDYA0A0U1RRE5 68 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 F5H768 121 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 F6UB75 175 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 RD3LP0DJH9 198 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 DEFB130BP0DP73 79 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 DEFB130AP0DP74 79 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 SLC25A4P12235 298 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 NKX2-1P43699 371 aaPredicted RBP4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 RPL5P46777 297 aaKnown RBP4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 UCP3P55916 312 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 YPEL3P61236 119 aaPredicted RBP4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 PSG9Q00887 426 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 CLINT1Q14677 625 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 SCGB2B2Q4G0G5 96 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 RNASE10Q5GAN6 216 aaKnown RBP4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 FAM78BQ5VT40 261 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 ETFRF1Q6IPR1 90 aa4.73□□□□□ -1.65
RTFDC1-206ENST00000477485 PRSS54Q6PEW0 395 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms