RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 ZNF682O95780 498 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 RBP1P09455 135 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 SRSF6Q13247 344 aaKnown RBP0.78□□□□□ -2.28
LTN1-204ENST00000475344 EDDM3AQ14507 147 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 IAH1Q2TAA2 248 aaPredicted RBP0.78□□□□□ -2.28
LTN1-204ENST00000475344 C12orf74Q32Q52 190 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 TRAPPC6BQ86SZ2 158 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 OR6V1Q8N148 313 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 HIST3H2BBQ8N257 126 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 CT55Q8WUE5 264 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 BORCS7Q96B45 105 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 PRAP1Q96NZ9 151 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 UCK1Q9HA47 277 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 TAS2R4Q9NYW5 299 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 IDI2-AS1Q9NZ38 188 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 CCDC144AA2RUR9 1427 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 KIF1BO60333 1816 aa0.78□□□□□ -2.29
LTN1-204ENST00000475344 DOCK4Q8N1I0 1966 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 hCG_1818297A0A087WSY0 165 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 C2orf70A6NJV1 201 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 A8MT66 165 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 TMEM114B3SHH9 223 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 SMIM17P0DL12 118 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 RAB4BP61018 213 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 RHOGP84095 191 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 LINC01554Q52M75 96 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 KRT222Q8N1A0 295 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 LINC00311Q8N616 119 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 C2orf50Q96LR7 162 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 CMSS1Q9BQ75 279 aaKnown RBP0.77□□□□□ -2.29
LTN1-204ENST00000475344 CCDC90BQ9GZT6 254 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 OSTCQ9NRP0 149 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 GLTPQ9NZD2 209 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 HS3ST2Q9Y278 367 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 C22orf24Q9Y442 160 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 NCOA1Q15788 1441 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 UNC13CQ8NB66 2214 aa0.77□□□□□ -2.29
LTN1-204ENST00000475344 MCM3APO60318 1980 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 TAF1LQ8IZX4 1826 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 PIK3C2GO75747 1445 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 PDE6DO43924 150 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 HAND1O96004 215 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 S100A4P26447 101 aaKnown RBP0.76□□□□□ -2.29
LTN1-204ENST00000475344 YPEL3P61236 119 aaPredicted RBP0.76□□□□□ -2.29
LTN1-204ENST00000475344 CCL7P80098 99 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 TMEM97Q5BJF2 176 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 RNASE10Q5GAN6 216 aaKnown RBP0.76□□□□□ -2.29
LTN1-204ENST00000475344 GDPD1Q8N9F7 314 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 OR52L1Q8NGH7 329 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 OR51A2Q8NGJ7 313 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 SLC25A40Q8TBP6 338 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 WFDC5Q8TCV5 224 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 TRIM4Q9C037 500 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 RNF122Q9H9V4 155 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 KLK9Q9UKQ9 250 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 FBXO5Q9UKT4 447 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 SLC22A13Q9Y226 551 aa0.76□□□□□ -2.29
LTN1-204ENST00000475344 MYO18AQ92614 2054 aaKnown RBP0.76□□□□□ -2.29
LTN1-204ENST00000475344 MED12Q93074 2177 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 TRAV3A0A0B4J244 114 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 IGKV1-9A0A0C4DH69 117 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 C7orf71A4D174 169 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 C1orf196B1AJZ1 125 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 J3QRK9 145 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 M0R2N4 97 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 E2F6O75461 281 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 PROSCO94903 275 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 UBL3O95164 117 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 SERPINE1P05121 402 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 CTXN2P0C2S0 81 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 MGST1P10620 155 aaKnown RBP0.75□□□□□ -2.29
LTN1-204ENST00000475344 SSR2P43308 183 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 AP3S2P59780 193 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 ERVS71-1P61550 626 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 HIST1H3AP68431 136 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 H3F3AP84243 136 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 OOSP2Q86WS3 158 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 OR13D1Q8NGV5 346 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 ZNF418Q8TF45 676 aaPredicted RBP0.75□□□□□ -2.29
LTN1-204ENST00000475344 C4orf3Q8WVX3 66 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 ADAT3Q96EY9 351 aaPredicted RBP0.75□□□□□ -2.29
LTN1-204ENST00000475344 SIGMAR1Q99720 223 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 KIAA1549Q9HCM3 1950 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 PLXNA4Q9HCM2 1894 aa0.75□□□□□ -2.29
LTN1-204ENST00000475344 ADGRB2O60241 1585 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 TRBV6-7A0A0A0MS04 114 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 CLDN25C9JDP6 229 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 S100A6P06703 90 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 C8GP07360 202 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 OR4E1P0C645 316 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 PPIBP23284 216 aaKnown RBP0.74□□□□□ -2.29
LTN1-204ENST00000475344 CASP1P29466 404 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 SRIP30626 198 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 ZNF93P35789 620 aaPredicted RBP0.74□□□□□ -2.29
LTN1-204ENST00000475344 Q6Q795 121 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 LCA10Q71F78 164 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 OR8D4Q8NGM9 314 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 OR10J5Q8NHC4 309 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 ITFG2Q969R8 447 aa0.74□□□□□ -2.29
LTN1-204ENST00000475344 GPR146Q96CH1 333 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms