RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 METRNQ9UJH8 293 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 IGLV3-19P01714 112 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 IZUMO1RA6ND01 250 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 C10orf126Q8N4M7 172 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 IGKV1-9A0A0C4DH69 117 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 OR9G9P0C7N8 305 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 LINC00614P0C842 121 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 MYOD1P15172 320 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 TRBV6-7A0A0A0MS04 114 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 GZMBP10144 247 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 NRN1LQ496H8 165 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 VKORC1Q9BQB6 163 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 MLNRO43193 412 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 C1QTNF9P0C862 333 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 SELLP14151 372 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 ADMP35318 185 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 RNF126Q9BV68 326 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 ST20Q9HBF5 79 aa9.12□□□□□ -0.95
VAPB-204ENST00000475243 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
VAPB-204ENST00000475243 TTC9CQ8N5M4 171 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 A0A0A6YYD4 124 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 PRR32B1ATL7 298 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 RIPPLY3P57055 190 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 RPL23P62829 140 aaKnown RBP9.11□□□□□ -0.95
VAPB-204ENST00000475243 PRR31Q5SQ13 230 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 TMEM144Q7Z5S9 345 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 CIARTQ8N365 385 aaPredicted RBP9.11□□□□□ -0.95
VAPB-204ENST00000475243 OTORQ9NRC9 128 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 PEF1Q9UBV8 284 aaKnown RBP9.11□□□□□ -0.95
VAPB-204ENST00000475243 NPIPB5A8MRT5 1133 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 FOXG1P55316 489 aaPredicted RBP9.11□□□□□ -0.95
VAPB-204ENST00000475243 FXYD7P58549 80 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 FAM90A1Q86YD7 464 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 NEUROG1Q92886 237 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 A0A1B0GV72 72 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 IGHV1-46P01743 117 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 SRSF3P84103 164 aaKnown RBP9.11□□□□□ -0.95
VAPB-204ENST00000475243 RPL15P61313 204 aaKnown RBP9.11□□□□□ -0.95
VAPB-204ENST00000475243 LINC00518Q8N0U6 118 aa9.11□□□□□ -0.95
VAPB-204ENST00000475243 NR2C2APQ86WQ0 139 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 ZNF257Q9Y2Q1 563 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 VGLL1Q99990 258 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 MGAMO43451 1857 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 PAX8Q06710 450 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 PSMG4Q5JS54 123 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 ATRAIDQ6UW56 229 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 TRAV5A0A0B4J249 113 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 RBMY1BA6NDE4 496 aaKnown RBP9.1□□□□□ -0.95
VAPB-204ENST00000475243 RBMY1EA6NEQ0 496 aaKnown RBP9.1□□□□□ -0.95
VAPB-204ENST00000475243 RBMY1DP0C7P1 496 aaKnown RBP9.1□□□□□ -0.95
VAPB-204ENST00000475243 RBMY1A1P0DJD3 496 aaKnown RBP9.1□□□□□ -0.95
VAPB-204ENST00000475243 RBMY1CP0DJD4 496 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 IFI27P40305 119 aaPredicted RBP9.1□□□□□ -0.95
VAPB-204ENST00000475243 NPC2P61916 151 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 DMRT1Q9Y5R6 373 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 VMO1Q7Z5L0 202 aa9.1□□□□□ -0.95
VAPB-204ENST00000475243 ZNF815PA8K554 130 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 ASCL2Q99929 193 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 IGLV3-12A0A075B6K2 115 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 SERF1AO75920 110 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 IGKV2-40A0A087WW87 121 aaPredicted RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 IGKV2D-40P01614 121 aaPredicted RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 WNT2P09544 360 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 CFHR1Q03591 330 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 TRAV2A0A0B4J234 112 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 OR9G4Q8NGQ1 327 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 SEPSECSQ9HD40 501 aaKnown RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 ZNF672Q499Z4 452 aaPredicted RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 SIGLEC15Q6ZMC9 328 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 RPL35AP18077 110 aaKnown RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 ZFP36L1Q07352 338 aaKnown RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 SRSF6Q13247 344 aaKnown RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 EFNB3Q15768 340 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 C10orf55Q5SWW7 151 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 PAQR4Q8N4S7 273 aaPredicted RBP9.09□□□□□ -0.95
VAPB-204ENST00000475243 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
VAPB-204ENST00000475243 TRAV21A0A0B4J279 112 aa9.09□□□□□ -0.96
VAPB-204ENST00000475243 DUTP33316 252 aaKnown RBP9.09□□□□□ -0.96
VAPB-204ENST00000475243 TMEM200BQ69YZ2 307 aa9.09□□□□□ -0.96
VAPB-204ENST00000475243 C1QL4Q86Z23 238 aa9.09□□□□□ -0.96
VAPB-204ENST00000475243 FLVCR1-AS1Q8TAF5 88 aa9.09□□□□□ -0.96
VAPB-204ENST00000475243 PSG8Q9UQ74 426 aa9.09□□□□□ -0.96
VAPB-204ENST00000475243 SLC25A20O43772 301 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 CD59P13987 128 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 BRD3OSQ6XYD6 125 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 FAM89BQ8N5H3 189 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 SAP30O75446 220 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 NDPQ00604 133 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 SAMD13Q5VXD3 122 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 EXOC3-AS1Q8N2X6 119 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 GTF3AQ92664 365 aaKnown RBP9.08□□□□□ -0.96
VAPB-204ENST00000475243 PMS2P5A8MQ11 134 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms