RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 HBG2P69892 147 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 GGTLC2Q14390 218 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 GUSBP11Q6P575 273 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 ADAT3Q96EY9 351 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 GFI1Q99684 422 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 FANCMQ8IYD8 2048 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 CABIN1Q9Y6J0 2220 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 SLC25A5P05141 298 aaKnown RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 HIST1H1DP16402 221 aaKnown RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 FOXA3P55318 350 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 FXYD4P59646 89 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 RSPO1Q2MKA7 263 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 SLC22A24Q8N4F4 322 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 OR11H6Q8NGC7 330 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 CMTM2Q8TAZ6 248 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 TTTY10Q9BZA0 68 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 PBOV1Q9GZY1 135 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 OR5V1Q9UGF6 321 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 ZDBF2Q9HCK1 2354 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 ARRDC5A6NEK1 342 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 H3BSH0 61 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 C3orf79P0CE67 100 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 HOXA4Q00056 320 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 TBC1D26Q86UD7 250 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 PPP1R1CQ8WVI7 109 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 UPK3BQ9BT76 320 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 ZNF71Q9NQZ8 489 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 V9GY05 133 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 OVOL1O14753 267 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 SNCGO76070 127 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 IFITM1P13164 125 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 SYT14P1Q58G82 188 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 LINC00311Q8N616 119 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 MBD3L2Q8NHZ7 208 aaPredicted RBP3.93□□□□□ -1.78
NPHP3-206ENST00000474871 AP1S3Q96PC3 154 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 FBXL15Q9H469 300 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 SDF2L1Q9HCN8 221 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 HCFC1P51610 2035 aa3.93□□□□□ -1.78
NPHP3-206ENST00000474871 USP34Q70CQ2 3546 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 TRAV1-1A0A0B4J248 108 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 DIRC3C9JPN6 131 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 J3QRE1 110 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 K7N7A8 449 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 CCL21O00585 134 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 LRP4O75096 1905 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 ZNF883P0CG24 379 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 PPP1CCP36873 323 aaKnown RBP3.92□□□□□ -1.78
NPHP3-206ENST00000474871 KIR2DS2P43631 304 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 GFERP55789 205 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 MARCH3Q86UD3 253 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 SBSPONQ8IVN8 264 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 NT5CQ8TCD5 201 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 NPIPB3Q92617 1050 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 TVP23CQ96ET8 276 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 C2orf70A6NJV1 201 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 ZAR1LA6NP61 321 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 TMEM250H0YL14 139 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 TRAF3IP2O43734 574 aaPredicted RBP3.92□□□□□ -1.78
NPHP3-206ENST00000474871 SERF1AO75920 110 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 OPRK1P41145 380 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 ZNF136P52737 540 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 ERHP84090 104 aaKnown RBP3.92□□□□□ -1.78
NPHP3-206ENST00000474871 NMSQ5H8A3 153 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 Q6ZRU5 148 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 OR10AG1Q8NH19 301 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 ZNF502Q8TBZ5 544 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 GTSF1Q8WW33 167 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 GLIPR2Q9H4G4 154 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 DEPPQ9NTK1 212 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 C10orf142B7Z368 130 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 VMA21Q3ZAQ7 101 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 UBE2NLQ5JXB2 153 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 VGLL1Q99990 258 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 BANF2Q9H503 90 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 MPC1Q9Y5U8 109 aa3.92□□□□□ -1.78
NPHP3-206ENST00000474871 CNOT1A5YKK6 2376 aaKnown RBP3.92□□□□□ -1.78
NPHP3-206ENST00000474871 INTS1Q8N201 2190 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 IGHV3-20A0A0C4DH32 117 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 M0R135 149 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 RND3P61587 244 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 RPS18P62269 152 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 ZNF506Q5JVG8 444 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 IBA57Q5T440 356 aaKnown RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 GOLT1AQ6ZVE7 132 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 FP248Q71RG6 208 aaPredicted RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 WDR31Q8NA23 367 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 C20orf173Q96LM9 149 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 HEATR5AQ86XA9 2040 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 IGKV1-8A0A0C4DH67 115 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 J3QR89 54 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 K7EM74 188 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 SIRPB1O00241 398 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 VPREB1P12018 145 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 ZNF791Q3KP31 576 aaPredicted RBP3.91□□□□□ -1.78
NPHP3-206ENST00000474871 SLC25A30Q5SVS4 291 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 STAC2Q6ZMT1 411 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 GNB4Q9HAV0 340 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 CMC2Q9NRP2 79 aa3.91□□□□□ -1.78
NPHP3-206ENST00000474871 CEP250Q9BV73 2442 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms