RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 OR51H1Q8NH63 302 aa3.62□□□□□ -1.83
PTPN4-209ENST00000469511 NUDCD2Q8WVJ2 157 aa3.62□□□□□ -1.83
PTPN4-209ENST00000469511 LSM10Q969L4 123 aaKnown RBP3.62□□□□□ -1.83
PTPN4-209ENST00000469511 ATP6V0BQ99437 205 aa3.62□□□□□ -1.83
PTPN4-209ENST00000469511 TMPRSS5Q9H3S3 457 aa3.62□□□□□ -1.83
PTPN4-209ENST00000469511 OR51B2Q9Y5P1 312 aa3.62□□□□□ -1.83
PTPN4-209ENST00000469511 RFNGQ9Y644 331 aa3.62□□□□□ -1.83
PTPN4-209ENST00000469511 PLAC8L1A1L4L8 177 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 HELTA6NFD8 242 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 ZNF705GA8MUZ8 300 aaPredicted RBP3.61□□□□□ -1.83
PTPN4-209ENST00000469511 FAM90A26D6RGX4 464 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 F6UB75 175 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 KRASP01116 189 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 HLA-DRB4P13762 266 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 NQO2P16083 231 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 ELK1P19419 428 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 AZU1P20160 251 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 NPPCP23582 126 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 CRYBB3P26998 211 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 G6PCP35575 357 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 TAS2R31P59538 309 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 RPP30P78346 268 aaKnown RBP3.61□□□□□ -1.83
PTPN4-209ENST00000469511 MRPS15P82914 257 aaKnown RBP3.61□□□□□ -1.83
PTPN4-209ENST00000469511 RCN1Q15293 331 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 IZUMO4Q1ZYL8 232 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 CDNFQ49AH0 187 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 ZNF600Q6ZNG1 722 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 ZNF818PQ6ZRF7 136 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 AHSA2Q719I0 299 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 OR1P1Q8NH06 330 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 FCAMRQ8WWV6 532 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 MOB3AQ96BX8 217 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 GINS3Q9BRX5 216 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 C1QTNF4Q9BXJ3 329 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 Q9H3A6 140 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 RAB22AQ9UL26 194 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 HLA-DRB4X5D2U9 266 aa3.61□□□□□ -1.83
PTPN4-209ENST00000469511 SMIM30A4D0T7 59 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 TMEM189A5PLL7 270 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 TMEM235A6NFC5 223 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 SMIM9A6NGZ8 99 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 RBFOX2O43251 390 aaKnown RBP eCLIP3.6□□□□□ -1.83
PTPN4-209ENST00000469511 ATP8B1O43520 1251 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 PRB4P10163 310 aaPredicted RBP3.6□□□□□ -1.83
PTPN4-209ENST00000469511 FGF9P31371 208 aaPredicted RBP3.6□□□□□ -1.83
PTPN4-209ENST00000469511 FCGR2CP31995 323 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 TALDO1P37837 337 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 LPAR6P43657 344 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 CCL18P55774 89 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 FXYD4P59646 89 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 LRP2P98164 4655 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 USF2Q15853 346 aaPredicted RBP3.6□□□□□ -1.83
PTPN4-209ENST00000469511 TIGITQ495A1 244 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 TMEM69Q5SWH9 247 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 CNIH2Q6PI25 160 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 C16orf54Q6UWD8 224 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 MS4A15Q8N5U1 240 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 OR4B1Q8NGF8 309 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 OR13F1Q8NGS4 319 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 TXN2Q99757 166 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 SLC5A7Q9GZV3 580 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 FNDC4Q9H6D8 234 aaPredicted RBP3.6□□□□□ -1.83
PTPN4-209ENST00000469511 PSORS1C1Q9UIG5 152 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 ANXA10Q9UJ72 324 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 LSM2Q9Y333 95 aaKnown RBP3.6□□□□□ -1.83
PTPN4-209ENST00000469511 V9GY05 133 aa3.6□□□□□ -1.83
PTPN4-209ENST00000469511 A0A087WTM6 91 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 A0A0J9YY99 117 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 IRGMA1A4Y4 181 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 MYL12BO14950 172 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 CYB5BO43169 146 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 SLC22A5O76082 557 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 IGKV1-39P01597 117 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 IGKV1-17P01599 117 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 HBE1P02100 147 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 IGKV1D-39P04432 117 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 CD5P06127 495 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 GNAO1P09471 354 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 DTYMKP23919 212 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 CALRP27797 417 aaKnown RBP3.59□□□□□ -1.83
PTPN4-209ENST00000469511 GNRHRP30968 328 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 FABP5Q01469 135 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 RRN3P1Q2M238 152 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 AADACL3Q5VUY0 350 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 HSD17B13Q7Z5P4 300 aaPredicted RBP3.59□□□□□ -1.83
PTPN4-209ENST00000469511 CYGBQ8WWM9 190 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 FCGR1BQ92637 280 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 ATG5Q9H1Y0 275 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 FKBP14Q9NWM8 211 aa3.59□□□□□ -1.83
PTPN4-209ENST00000469511 A0A1W2PPQ1 181 aa3.58□□□□□ -1.84
PTPN4-209ENST00000469511 A0A1W2PS18 150 aa3.58□□□□□ -1.84
PTPN4-209ENST00000469511 EBAG9O00559 213 aa3.58□□□□□ -1.84
PTPN4-209ENST00000469511 CRXO43186 299 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-209ENST00000469511 PGLYRP1O75594 196 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-209ENST00000469511 PPYP01298 95 aa3.58□□□□□ -1.84
PTPN4-209ENST00000469511 RLN1P04808 185 aa3.58□□□□□ -1.84
PTPN4-209ENST00000469511 CTXN2P0C2S0 81 aa3.58□□□□□ -1.84
PTPN4-209ENST00000469511 GADD45AP24522 165 aa3.58□□□□□ -1.84
PTPN4-209ENST00000469511 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-209ENST00000469511 NUTF2P61970 127 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms