RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 IGLV2-23P01705 113 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 ZNF705DP0CH99 300 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-221ENST00000469415 ZNF705BP0CI00 300 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-221ENST00000469415 APOBEC3AP31941 199 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-221ENST00000469415 TAS2R45P59539 299 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 TMEM177Q53S58 311 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 LINC00305Q7Z4B0 112 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 BAGE3Q86Y29 109 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 BAGE2Q86Y30 109 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 TMEM18Q96B42 140 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 TMEM186Q96B77 213 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 TMEM133Q9H2Q1 129 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 LINC00574Q9H8X3 128 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 TMEM167BQ9NRX6 74 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 NAT8BQ9UHF3 227 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 EREGO14944 169 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 TMEM155Q4W5P6 130 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 PNKDQ8N490 385 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 C11orf42Q8N5U0 333 aa14.35□□□□□ -0.11
MCF2L-221ENST00000469415 PAXXQ9BUH6 204 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 SLC25A2Q9BXI2 301 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 IGHV2-26A0A0B4J1V2 119 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 SIAH2O43255 324 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 MFAP2P55001 183 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 ZNF664Q8N3J9 261 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 TMEM167AQ8TBQ9 72 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 TNFRSF19Q9NS68 423 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 IL36BQ9NZH7 164 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 CELSR1Q9NYQ6 3014 aa14.34□□□□□ -0.11
MCF2L-221ENST00000469415 A6NNC1 897 aa14.33□□□□□ -0.11
MCF2L-221ENST00000469415 TSTD3H0UI37 97 aa14.33□□□□□ -0.11
MCF2L-221ENST00000469415 RPEL1Q2QD12 228 aa14.33□□□□□ -0.11
MCF2L-221ENST00000469415 KLF17Q5JT82 389 aaPredicted RBP14.33□□□□□ -0.11
MCF2L-221ENST00000469415 ST6GALNAC6Q969X2 333 aa14.33□□□□□ -0.11
MCF2L-221ENST00000469415 PPIAL4CA0A0B4J2A2 164 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 K7ENP7 123 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 PPIAL4GP0DN37 164 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 LCN2P80188 198 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 FOXL1Q12952 345 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 KLRD1Q13241 179 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 RPEQ96AT9 228 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 C22orf46C9J442 243 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 CNIH1O95406 144 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 SFTPCP11686 197 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 JOSD1Q15040 202 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-221ENST00000469415 PDPNQ86YL7 162 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 VSTM2AQ8TAG5 236 aa14.33□□□□□ -0.12
MCF2L-221ENST00000469415 CRISP2P16562 243 aa14.32□□□□□ -0.12
MCF2L-221ENST00000469415 RPL27AP46776 148 aaKnown RBP14.32□□□□□ -0.12
MCF2L-221ENST00000469415 HES1Q14469 280 aa14.32□□□□□ -0.12
MCF2L-221ENST00000469415 IBA57Q5T440 356 aaKnown RBP14.32□□□□□ -0.12
MCF2L-221ENST00000469415 FAM167A-AS1Q96KT0 104 aa14.32□□□□□ -0.12
MCF2L-221ENST00000469415 MS4A10Q96PG2 267 aa14.32□□□□□ -0.12
MCF2L-221ENST00000469415 AMMECR1Q9Y4X0 333 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-221ENST00000469415 V9GYV3 84 aa14.32□□□□□ -0.12
MCF2L-221ENST00000469415 JKAMPQ9P055 326 aa14.32□□□□□ -0.12
MCF2L-221ENST00000469415 IGKV1D-37A0A075B6S9 117 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 A0A1W2PN81 502 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 ISLRO14498 428 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 SERF1AO75920 110 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 TYMSP04818 313 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 ZNF25P17030 456 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-221ENST00000469415 SUB1P53999 127 aaKnown RBP eCLIP14.31□□□□□ -0.12
MCF2L-221ENST00000469415 TMEM249Q2WGJ8 235 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 RBP4P02753 201 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 LYZP61626 148 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 SAMD10Q9BYL1 202 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 CD99P14209 185 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 CAMPP49913 170 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 DLX6P56179 175 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 GBGT1Q8N5D6 347 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 CMTM2Q8TAZ6 248 aa14.31□□□□□ -0.12
MCF2L-221ENST00000469415 CORTO00230 105 aa14.3□□□□□ -0.12
MCF2L-221ENST00000469415 SLC25A5P05141 298 aaKnown RBP14.3□□□□□ -0.12
MCF2L-221ENST00000469415 ZNF672Q499Z4 452 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-221ENST00000469415 REC114Q7Z4M0 266 aa14.3□□□□□ -0.12
MCF2L-221ENST00000469415 TXNDC17Q9BRA2 123 aa14.3□□□□□ -0.12
MCF2L-221ENST00000469415 ZNF835Q9Y2P0 537 aa14.3□□□□□ -0.12
MCF2L-221ENST00000469415 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.3□□□□□ -0.12
MCF2L-221ENST00000469415 CACNA1AO00555 2505 aa14.3□□□□□ -0.12
MCF2L-221ENST00000469415 PGPA6NDG6 321 aa14.3□□□□□ -0.12
MCF2L-221ENST00000469415 BTF3L4Q96K17 158 aa14.3□□□□□ -0.12
MCF2L-221ENST00000469415 IGHV1-3A0A0C4DH29 117 aa14.29□□□□□ -0.12
MCF2L-221ENST00000469415 IGLC7A0M8Q6 106 aa14.29□□□□□ -0.12
MCF2L-221ENST00000469415 LDLRAD2Q5SZI1 272 aa14.29□□□□□ -0.12
MCF2L-221ENST00000469415 TCRBV4S1A1TA0A5B7 111 aa14.29□□□□□ -0.12
MCF2L-221ENST00000469415 B9A039 149 aa14.29□□□□□ -0.12
MCF2L-221ENST00000469415 TNFRSF13BO14836 293 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-221ENST00000469415 MMDQ15546 238 aa14.29□□□□□ -0.12
MCF2L-221ENST00000469415 TDRG1Q3Y452 100 aa14.29□□□□□ -0.12
MCF2L-221ENST00000469415 TRAV8-1A0A0A6YYK1 113 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 NDUFS7O75251 213 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 PMCHP20382 165 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 PKIAP61925 76 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 Q71RC1 249 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-221ENST00000469415 CACNG8Q8WXS5 425 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 NEU1Q99519 415 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 VKORC1Q9BQB6 163 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 HSPB9Q9BQS6 159 aa14.28□□□□□ -0.12
MCF2L-221ENST00000469415 SSBP4Q9BWG4 385 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms