RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 Q499Y3 187 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 ACTL10Q5JWF8 245 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 FAM222AQ5U5X8 452 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 UBE2UQ5VVX9 321 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 MEDAGQ5VYS4 303 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 OR10K2Q6IF99 312 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 ZNF705AQ6ZN79 300 aaPredicted RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 Q6ZRN7 208 aaPredicted RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 KCTD9Q7L273 389 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 GDPD1Q8N9F7 314 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 OR4S2Q8NH73 311 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 OR10J5Q8NHC4 309 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 TRUB1Q8WWH5 349 aaKnown RBP2.83□□□□□ -1.96
SSR3-204ENST00000467733 SLC29A1Q99808 456 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 VGLL1Q99990 258 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 DCUN1D5Q9BTE7 237 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 VSIRQ9H7M9 311 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 PLEKHJ1Q9NW61 149 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 C21orf62Q9NYP8 219 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 RABAC1Q9UI14 185 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 PRELID3BQ9Y3B1 194 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 LINC00588Q9Y4M8 146 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 PUS1Q9Y606 427 aaKnown RBP eCLIP2.83□□□□□ -1.96
SSR3-204ENST00000467733 TNXBP22105 4242 aa2.83□□□□□ -1.96
SSR3-204ENST00000467733 TRBV6-7A0A0A0MS04 114 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 TRAV14DV4A0A0A6YYC5 116 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 G3V2T6 193 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 K7EIM0 57 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 K7EQG2 157 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 IFNA5P01569 189 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 CTSGP08311 255 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 CD3GP09693 182 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 ZNF688P0C7X2 276 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 LIMS3P0CW19 117 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 LIMS4P0CW20 117 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 CRHBPP24387 322 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 DAD1P61803 113 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 NUTF2P61970 127 aaKnown RBP2.82□□□□□ -1.96
SSR3-204ENST00000467733 RPS11P62280 158 aaKnown RBP eCLIP2.82□□□□□ -1.96
SSR3-204ENST00000467733 DLK1P80370 383 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 CYCSP99999 105 aaKnown RBP2.82□□□□□ -1.96
SSR3-204ENST00000467733 UNC119Q13432 240 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 FLOT2Q14254 428 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 VWC2Q2TAL6 325 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 TIMM50Q3ZCQ8 353 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 Q56UQ5 140 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 YIF1BQ5BJH7 314 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 OR2B11Q5JQS5 317 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 TTC23Q5W5X9 447 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 ZNF773Q6PK81 442 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 SPATA24Q86W54 205 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 CBR4Q8N4T8 237 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 UBAC2Q8NBM4 344 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 DUSP18Q8NEJ0 188 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 STXBP6Q8NFX7 210 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 DEFB104AQ8WTQ1 72 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 DERL3Q96Q80 235 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 CMSS1Q9BQ75 279 aaKnown RBP2.82□□□□□ -1.96
SSR3-204ENST00000467733 GINS3Q9BRX5 216 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 TMEM70Q9BUB7 260 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 Q9H8V8 135 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 BET1LQ9NYM9 111 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 XCL2Q9UBD3 114 aa2.82□□□□□ -1.96
SSR3-204ENST00000467733 RBM7Q9Y580 266 aaKnown RBP2.82□□□□□ -1.96
SSR3-204ENST00000467733 IGHV3-21A0A0B4J1V1 117 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 A0A1W2PPK0 400 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 FOXI3A8MTJ6 420 aaPredicted RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 TMEM14DPA8MWL7 114 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 SOCS1O15524 211 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 YIF1AO95070 293 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 HRASP01112 189 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 OXTP01178 125 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 SERPINE2P07093 398 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 FCGR3AP08637 254 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 CD36P16671 472 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 LINC00315P59091 139 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 TAS2R43P59537 309 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 RPL30P62888 115 aaKnown RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 HAMPP81172 84 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 QRFPP83859 136 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 WT1-ASQ06250 92 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 USF2Q15853 346 aaPredicted RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 KCTD21Q4G0X4 260 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 C1orf100Q5SVJ3 147 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 OGFRL1Q5TC84 451 aaPredicted RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 THOC7Q6I9Y2 204 aaKnown RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 SLC25A24Q6NUK1 477 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 SSX7Q7RTT5 188 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 HSD17B13Q7Z5P4 300 aaPredicted RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 H1FOOQ8IZA3 346 aaPredicted RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 FAM89BQ8N5H3 189 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 OR10W1Q8NGF6 305 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 OR52I1Q8NGK6 324 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 DCANP1Q8TF63 244 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 TCTEX1D2Q8WW35 142 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 PGLYRP3Q96LB9 341 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 HSD17B10Q99714 261 aaKnown RBP2.81□□□□□ -1.96
SSR3-204ENST00000467733 GINS4Q9BRT9 223 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 UPK3BQ9BT76 320 aa2.81□□□□□ -1.96
SSR3-204ENST00000467733 PECRQ9BY49 303 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms