RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TRAV30A0A087WSZ9 112 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 A0A087X0T9 212 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 TRGV10A0A0A0MS01 117 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 GGT3PA6NGU5 568 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 BBIP1A8MTZ0 92 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 GGTLC3B5MD39 225 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 NDUFB3O43676 98 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 NAPSAO96009 420 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 MUC1P15941 1255 aaPredicted RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 SLC25A16P16260 332 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 GNG4P50150 75 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 INSL3P51460 131 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 ZNF80P51504 273 aaPredicted RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 RBM11P57052 281 aaKnown RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 FXYD7P58549 80 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 MYL5Q02045 173 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 MEF2BQ02080 365 aaPredicted RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 RPL18Q07020 188 aaKnown RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 SYCNQ0VAF6 134 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 TMEM244Q5VVB8 128 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 IGFL3Q6UXB1 125 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 NTM-AS1Q6ZSK4 140 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 RPP25LQ8N5L8 163 aaKnown RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 OR8D4Q8NGM9 314 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 RBPMSQ93062 196 aaKnown RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 CARD19Q96LW7 228 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 GINS4Q9BRT9 223 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 ADAT1Q9BUB4 502 aaKnown RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 TMEM133Q9H2Q1 129 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 CST9LQ9H4G1 147 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 SCN3BQ9NY72 215 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 CCDC167Q9P0B6 97 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 MARCOQ9UEW3 520 aaPredicted RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 ZNF222Q9UK12 451 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 TNFSF18Q9UNG2 199 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 RPL26L1Q9UNX3 145 aaKnown RBP2.39□□□□□ -2.03
VPS50-209ENST00000467326 TTC37Q6PGP7 1564 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 REREQ9P2R6 1566 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 NAV1Q8NEY1 1877 aa2.39□□□□□ -2.03
VPS50-209ENST00000467326 MYH3P11055 1940 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 DYSFO75923 2080 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 TMEM2Q9UHN6 1383 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 ADGBQ8N7X0 1667 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 TRBV24-1A0A075B6N3 115 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 IGKV1D-43A0A0B4J1Z2 117 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 TRAV13-1A0A0B4J241 112 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 A6NED7 52 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 A8MWP6 167 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 BUB1B-PAK6H3BSN5 160 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 TMEM256-PLSCR3K7ERE1 68 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 NPFFO15130 113 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 SLC25A20O43772 301 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 SH2D1AO60880 128 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 MT-ND4LP03901 98 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 AKAIN1P0CW23 69 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 IGHV3-30-3P0DP02 117 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 CRYBB3P26998 211 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 CLIP1P30622 1438 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 RPL22P35268 128 aaKnown RBP2.38□□□□□ -2.03
VPS50-209ENST00000467326 TSPEAR-AS2P59090 65 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 RPL26P61254 145 aaKnown RBP2.38□□□□□ -2.03
VPS50-209ENST00000467326 LSM3P62310 102 aaKnown RBP2.38□□□□□ -2.03
VPS50-209ENST00000467326 CDK6Q00534 326 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 HES1Q14469 280 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 LGALS9BQ3B8N2 356 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 SP6Q3SY56 376 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 LINC01554Q52M75 96 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 LGALS9CQ6DKI2 356 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 EIF5AL1Q6IS14 154 aaKnown RBP2.38□□□□□ -2.03
VPS50-209ENST00000467326 SCIMPQ6UWF3 145 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 NALCNQ8IZF0 1738 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 C4orf33Q8N1A6 199 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 HIST3H2BBQ8N257 126 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 ZFAND2AQ8N6M9 145 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 PACRGLQ8N7B6 248 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 APCDD1LQ8NCL9 501 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 CIRBP-AS1Q8TBR5 109 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 BRK1Q8WUW1 75 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 PRG4Q92954 1404 aaPredicted RBP2.38□□□□□ -2.03
VPS50-209ENST00000467326 TMEM191AQ9H0A3 160 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 OSTCQ9NRP0 149 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 ZNF355PQ9NSJ1 428 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 TP73-AS1Q9UF72 201 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 HSPE1-MOB4S4R3N1 261 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 HECW1Q76N89 1606 aa2.38□□□□□ -2.03
VPS50-209ENST00000467326 MIA3Q5JRA6 1907 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 ODAMA1E959 279 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 OR2T8A6NH00 312 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 A8MWV9 139 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 C11orf94C9JXX5 98 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 H3BMG7 143 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 M0R378 163 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 LEPROTO15243 131 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 HIST1H2BKO60814 126 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 SOD1P00441 154 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 NPYP01303 97 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 HIST1H2BJP06899 126 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 IGLC6P0CF74 106 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 TRAPPC2P0DI81 140 aa2.37□□□□□ -2.03
VPS50-209ENST00000467326 TRAPPC2BP0DI82 140 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms