RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
APOBEC1-202ENST00000467171 SEPSECSQ9HD40 501 aaKnown RBP7.53□□□□□ -1.2
APOBEC1-202ENST00000467171 TECRQ9NZ01 308 aaKnown RBP7.53□□□□□ -1.2
APOBEC1-202ENST00000467171 MRPL36Q9P0J6 103 aaKnown RBP7.53□□□□□ -1.2
APOBEC1-202ENST00000467171 ARHGAP32A7KAX9 2087 aa7.53□□□□□ -1.2
APOBEC1-202ENST00000467171 PTPN13Q12923 2485 aa7.53□□□□□ -1.2
APOBEC1-202ENST00000467171 DCHS2Q6V1P9 2916 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 USP9YO00507 2555 aaPredicted RBP7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 HMGB3O15347 200 aaKnown RBP7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 PAX4O43316 350 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 PDE6DO43924 150 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 EIF3GO75821 320 aaKnown RBP eCLIP7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 FABP1P07148 127 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 IGLC1P0CG04 106 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 ARL14EPLP0DKL9 152 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 C8orf88P0DMB2 117 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 IGHV4-38-2P0DP08 117 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 GATA2P23769 480 aaPredicted RBP7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 GCHFRP30047 84 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 FCGR2BP31994 310 aaPredicted RBP7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 RHEBQ15382 184 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 KLF17Q5JT82 389 aaPredicted RBP7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 FAM78BQ5VT40 261 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 SPATA31B1PQ5VZV4 182 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 FAM90A2PQ658T7 463 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 RUSC1-AS1Q66K80 236 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 MIR17HGQ75NE6 70 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 C5orf56Q8N8D9 126 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 SGMS2Q8NHU3 365 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 TMEM37Q8WXS4 190 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 FANCD2OSQ96PS1 177 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 DNAJC4Q9NNZ3 241 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 TMEM167BQ9NRX6 74 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 THYN1Q9P016 225 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 MOB4Q9Y3A3 225 aa7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.21
APOBEC1-202ENST00000467171 NAV2Q8IVL1 2488 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 TRAV30A0A087WSZ9 112 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 A0A0U1RQK1 487 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 F6UZH7 168 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 H3BQ15 152 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 PAGE4O60829 102 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 APELAP0DMC3 54 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 HIST1H1BP16401 226 aaKnown RBP7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 CRIP2P52943 208 aaPredicted RBP7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 ZNF90Q03938 601 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 PNRC1Q12796 327 aaPredicted RBP7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 C16orf82Q7Z2V1 217 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 FAM110DQ8TAY7 271 aaPredicted RBP7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 NIPSNAP3BQ9BS92 247 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 FAM103A1Q9BTL3 118 aaKnown RBP7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 TUBA4BQ9H853 241 aa7.51□□□□□ -1.21
APOBEC1-202ENST00000467171 IGHV3OR16-10A0A075B7F0 116 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 A6NDX4 124 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 FAM74A7A6NL05 159 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 C11orf94C9JXX5 98 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 M0QZK8 103 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 COX7A2P2O60397 106 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 IGHV3-48P01763 117 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 AKIRIN2Q53H80 203 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 AWAT1Q58HT5 328 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 Q5PR19 223 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 C10orf113Q5VZT2 155 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 BRD3OSQ6XYD6 125 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 IQCF2Q8IXL9 164 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 STXBP6Q8NFX7 210 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 VN1R17PQ8TDU5 208 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 FAM167A-AS1Q96KT0 104 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 TXN2Q99757 166 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 HSPB9Q9BQS6 159 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 SMCO4Q9NRQ5 59 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 CHD6Q8TD26 2715 aa7.5□□□□□ -1.21
APOBEC1-202ENST00000467171 A0A087WWC5 75 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 C7orf77A4D0Y5 90 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 B4DEV8 164 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 M0R036 132 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 HYPMO75409 117 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 BRI3O95415 125 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 FSHBP01225 129 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 IGKV1-17P01599 117 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 IGHV4-31P0DP07 118 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 MFAP4P55083 255 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 YPEL3P61236 119 aaPredicted RBP7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 PATE2Q6UY27 113 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 C9orf139Q6ZV77 190 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 OR4F5Q8NH21 305 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 TMEM190Q8WZ59 177 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 C11orf52Q96A22 123 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 ZNF503Q96F45 646 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 OR4F4Q96R69 305 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 SSX3Q99909 188 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 SLC25A2Q9BXI2 301 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 PUS1Q9Y606 427 aaKnown RBP eCLIP7.49□□□□□ -1.21
APOBEC1-202ENST00000467171 WNK2Q9Y3S1 2297 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 TRBV9A0A0B4J1U6 114 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 A0A1W2PRE2 83 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms