RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 URM1Q9BTM9 101 aaKnown RBP3.91□□□□□ -1.78
NCL-208ENST00000466274 CABLES2Q9BTV7 478 aa3.91□□□□□ -1.78
NCL-208ENST00000466274 KCNK15Q9H427 330 aa3.91□□□□□ -1.78
NCL-208ENST00000466274 DPH3P1Q9H4G8 78 aa3.91□□□□□ -1.78
NCL-208ENST00000466274 A0A0A6YYD4 124 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 TRAV5A0A0B4J249 113 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 A0A0J9YY99 117 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 SAC3D1A6NKF1 404 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 EBAG9O00559 213 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 ATP8B1O43520 1251 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 LALBAP00709 142 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 CRYBB3P26998 211 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 RPL37AP61513 92 aaKnown RBP3.9□□□□□ -1.79
NCL-208ENST00000466274 RPS11P62280 158 aaKnown RBP eCLIP3.9□□□□□ -1.79
NCL-208ENST00000466274 ST3GAL4Q11206 333 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 TIMM50Q3ZCQ8 353 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 Q499Y3 187 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 MEDAGQ5VYS4 303 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 C1orf158Q8N1D5 194 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 OR4B1Q8NGF8 309 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 OR1L8Q8NGR8 309 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 OR1P1Q8NH06 330 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 TMEM56Q96MV1 263 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 ABHD1Q96SE0 405 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 HDHD3Q9BSH5 251 aaPredicted RBP3.9□□□□□ -1.79
NCL-208ENST00000466274 GABARAPL3Q9BY60 117 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 FAM107BQ9H098 131 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 GABARAPL1Q9H0R8 117 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 PLEKHA2Q9HB19 425 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 SCPEP1Q9HB40 452 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 RBMX2Q9Y388 322 aaKnown RBP3.9□□□□□ -1.79
NCL-208ENST00000466274 LY96Q9Y6Y9 160 aa3.9□□□□□ -1.79
NCL-208ENST00000466274 FAM90A26D6RGX4 464 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 UPK2O00526 184 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 NXPH4O95158 308 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 IGLV2-8P01709 118 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 CDK1P06493 297 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 CD3GP09693 182 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 NQO2P16083 231 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 GABRB1P18505 474 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 EVI2AP22794 236 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 ID1P41134 155 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 TAS2R31P59538 309 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 WT1-ASQ06250 92 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 TDRG1Q3Y452 100 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 ACSM3Q53FZ2 586 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 IGSF11Q5DX21 431 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 EBLN2Q6P2I7 272 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 FOXI2Q6ZQN5 318 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 SCXQ7RTU7 201 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 AQP12AQ8IXF9 295 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 ZNF709Q8N972 641 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 HSD17B11Q8NBQ5 300 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 OR10W1Q8NGF6 305 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 TMEM230Q96A57 120 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 IGF2BP2-AS1Q96M15 143 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 SLC29A1Q99808 456 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 CHAC1Q9BUX1 264 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 HINT2Q9BX68 163 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 DCSTAMPQ9H295 470 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 SAV1Q9H4B6 383 aaPredicted RBP3.89□□□□□ -1.79
NCL-208ENST00000466274 DNAJC4Q9NNZ3 241 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 NRN1Q9NPD7 142 aa3.89□□□□□ -1.79
NCL-208ENST00000466274 TIMM8BQ9Y5J9 83 aaPredicted RBP3.89□□□□□ -1.79
NCL-208ENST00000466274 A0A0B4J293 547 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 TRBV5-5A0A0J9YX44 114 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 ZNF705GA8MUZ8 300 aaPredicted RBP3.88□□□□□ -1.79
NCL-208ENST00000466274 I3L2K1 104 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 ZNF701M0R085 212 aaPredicted RBP3.88□□□□□ -1.79
NCL-208ENST00000466274 DENRO43583 198 aaKnown RBP3.88□□□□□ -1.79
NCL-208ENST00000466274 MT-CO2P00403 227 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 LIMS3P0CW19 117 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 LIMS4P0CW20 117 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 FCGR1AP12314 374 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 TNFSF8P32971 234 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 RANBP1P43487 201 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 ERVK-16P61578 105 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 RPL30P62888 115 aaKnown RBP3.88□□□□□ -1.79
NCL-208ENST00000466274 UNC119Q13432 240 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 FCN2Q15485 313 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 TMPRSS11AQ6ZMR5 421 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 H1FOOQ8IZA3 346 aaPredicted RBP3.88□□□□□ -1.79
NCL-208ENST00000466274 LRTM2Q8N967 370 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 DMBX1Q8NFW5 382 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 SMIM19Q96E16 107 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 LINC00052Q96N35 136 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 NDUFA4L2Q9NRX3 87 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 FKBP11Q9NYL4 201 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 SPATA2Q9UM82 520 aa3.88□□□□□ -1.79
NCL-208ENST00000466274 TEX50A0A1B0GTY4 177 aa3.87□□□□□ -1.79
NCL-208ENST00000466274 LRCOL1A6NCL2 159 aa3.87□□□□□ -1.79
NCL-208ENST00000466274 FOXI3A8MTJ6 420 aaPredicted RBP3.87□□□□□ -1.79
NCL-208ENST00000466274 G3V2T6 193 aa3.87□□□□□ -1.79
NCL-208ENST00000466274 J3QRK9 145 aa3.87□□□□□ -1.79
NCL-208ENST00000466274 SOCS1O15524 211 aa3.87□□□□□ -1.79
NCL-208ENST00000466274 RBFOX2O43251 390 aaKnown RBP eCLIP3.87□□□□□ -1.79
NCL-208ENST00000466274 SNAPC5O75971 98 aa3.87□□□□□ -1.79
NCL-208ENST00000466274 HPRT1P00492 218 aa3.87□□□□□ -1.79
NCL-208ENST00000466274 INSP01308 110 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms