RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SPANXN5Q5MJ07 72 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 LCN12Q6JVE5 192 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 TOMM20LQ6UXN7 152 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 GSG1LQ6UXU4 331 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 OR1S2Q8NGQ3 325 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 DYNLRB2Q8TF09 96 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 NPIPB3Q92617 1050 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 RAB40CQ96S21 281 aa15.35■□□□□ 0.05
SKA3-205ENST00000465471 STRAPQ9Y3F4 350 aaKnown RBP15.35■□□□□ 0.05
SKA3-205ENST00000465471 IGHV3OR16-8A0A075B7F1 116 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 C7orf66A4D0T2 115 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 SCGB2A1O75556 95 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 OR10J1P30954 320 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 GAMTQ14353 236 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 TIGITQ495A1 244 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 C20orf24Q9BUV8 137 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 C11orf1Q9H5F2 150 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 PSENENQ9NZ42 101 aa15.34■□□□□ 0.05
SKA3-205ENST00000465471 LSM4Q9Y4Z0 139 aaKnown RBP15.34■□□□□ 0.05
SKA3-205ENST00000465471 PUS1Q9Y606 427 aaKnown RBP eCLIP15.34■□□□□ 0.05
SKA3-205ENST00000465471 PMS2P5A8MQ11 134 aa15.33■□□□□ 0.04
SKA3-205ENST00000465471 K7EPK0 472 aa15.33■□□□□ 0.04
SKA3-205ENST00000465471 YPEL3P61236 119 aaPredicted RBP15.33■□□□□ 0.04
SKA3-205ENST00000465471 TMEM14EPQ6UXP3 125 aa15.33■□□□□ 0.04
SKA3-205ENST00000465471 ACY3Q96HD9 319 aa15.33■□□□□ 0.04
SKA3-205ENST00000465471 TSC22D2O75157 780 aa15.32■□□□□ 0.04
SKA3-205ENST00000465471 YIF1AO95070 293 aa15.32■□□□□ 0.04
SKA3-205ENST00000465471 SCAF4O95104 1147 aaKnown RBP15.32■□□□□ 0.04
SKA3-205ENST00000465471 BTNL8Q6UX41 500 aa15.32■□□□□ 0.04
SKA3-205ENST00000465471 SLC35E1Q96K37 410 aa15.32■□□□□ 0.04
SKA3-205ENST00000465471 PAIP2BQ9ULR5 123 aaKnown RBP15.32■□□□□ 0.04
SKA3-205ENST00000465471 IGKV1D-37A0A075B6S9 117 aa15.31■□□□□ 0.04
SKA3-205ENST00000465471 IGHV7-4-1A0A0J9YVY3 117 aa15.31■□□□□ 0.04
SKA3-205ENST00000465471 ZNF785A8K8V0 405 aa15.31■□□□□ 0.04
SKA3-205ENST00000465471 ZNF207O43670 478 aaKnown RBP15.31■□□□□ 0.04
SKA3-205ENST00000465471 DCTN2Q13561 401 aaKnown RBP15.31■□□□□ 0.04
SKA3-205ENST00000465471 TMEM61Q8N0U2 210 aa15.31■□□□□ 0.04
SKA3-205ENST00000465471 GINS3Q9BRX5 216 aa15.31■□□□□ 0.04
SKA3-205ENST00000465471 SMPXQ9UHP9 88 aa15.31■□□□□ 0.04
SKA3-205ENST00000465471 GOSR2O14653 212 aa15.3■□□□□ 0.04
SKA3-205ENST00000465471 THAP8Q8NA92 274 aa15.3■□□□□ 0.04
SKA3-205ENST00000465471 IGKV1OR2-108A0A075B7D4 117 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 TRAV14DV4A0A0A6YYC5 116 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 TRAV25A0A0B4J276 109 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 CCNKO75909 580 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 SIX6O95475 246 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 TOMM40O96008 361 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 RAB32Q13637 225 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 ACOT7LQ6ZUV0 252 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 Q8N1Y9 231 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 WDR89Q96FK6 387 aaPredicted RBP15.29■□□□□ 0.04
SKA3-205ENST00000465471 NMES1Q9C002 83 aa15.29■□□□□ 0.04
SKA3-205ENST00000465471 LSM5Q9Y4Y9 91 aaKnown RBP15.29■□□□□ 0.04
SKA3-205ENST00000465471 CHEK1O14757 476 aa15.28■□□□□ 0.04
SKA3-205ENST00000465471 H2BFSP57053 126 aa15.28■□□□□ 0.04
SKA3-205ENST00000465471 RHPN1-AS1Q9BWJ2 59 aa15.28■□□□□ 0.04
SKA3-205ENST00000465471 VSIRQ9H7M9 311 aa15.28■□□□□ 0.04
SKA3-205ENST00000465471 ALG5Q9Y673 324 aa15.28■□□□□ 0.04
SKA3-205ENST00000465471 SELENOKQ9Y6D0 94 aa15.28■□□□□ 0.04
SKA3-205ENST00000465471 SSNA1O43805 119 aa15.27■□□□□ 0.04
SKA3-205ENST00000465471 METTL15P1P0C7V9 234 aa15.27■□□□□ 0.04
SKA3-205ENST00000465471 CRYBB3P26998 211 aa15.27■□□□□ 0.04
SKA3-205ENST00000465471 Q8WTZ3 238 aa15.27■□□□□ 0.04
SKA3-205ENST00000465471 TRGV9Q99603 122 aa15.27■□□□□ 0.04
SKA3-205ENST00000465471 ZFP92A6NM28 416 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 FNDC10F2Z333 226 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 L7N2F9 121 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 RD3LP0DJH9 198 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 PSG1P11464 419 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 VAMP2P63027 116 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 DLK1P80370 383 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 RGS21Q2M5E4 152 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 OR8G2PQ6IF36 304 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 U3KQE9 123 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 TGP01266 2768 aa15.26■□□□□ 0.03
SKA3-205ENST00000465471 DNAH9Q9NYC9 4486 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 IGHV3-49A0A0A0MS15 119 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 TSPAN4O14817 238 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 DEDDO75618 318 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 APOHP02749 345 aaPredicted RBP15.25■□□□□ 0.03
SKA3-205ENST00000465471 S100A10P60903 97 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 CYCSP99999 105 aaKnown RBP15.25■□□□□ 0.03
SKA3-205ENST00000465471 ZNF90Q03938 601 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 ARL16Q0P5N6 197 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 USF2Q15853 346 aaPredicted RBP15.25■□□□□ 0.03
SKA3-205ENST00000465471 DEFB121Q5J5C9 76 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 FAM90A2PQ658T7 463 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 TMEM144Q7Z5S9 345 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 ST8SIA2Q92186 375 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 METTL26Q96S19 204 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 RNF2Q99496 336 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 LYRM2Q9NU23 88 aaPredicted RBP15.25■□□□□ 0.03
SKA3-205ENST00000465471 SMAD5-AS1Q9Y6J3 95 aa15.25■□□□□ 0.03
SKA3-205ENST00000465471 IL4P05112 153 aa15.24■□□□□ 0.03
SKA3-205ENST00000465471 PVALBP20472 110 aaPredicted RBP15.24■□□□□ 0.03
SKA3-205ENST00000465471 NPPCP23582 126 aa15.24■□□□□ 0.03
SKA3-205ENST00000465471 OXA1LQ15070 435 aa15.24■□□□□ 0.03
SKA3-205ENST00000465471 GUCA2BQ16661 112 aa15.24■□□□□ 0.03
SKA3-205ENST00000465471 RBPMS2Q6ZRY4 209 aaKnown RBP15.24■□□□□ 0.03
SKA3-205ENST00000465471 GTSCR1Q86UQ5 136 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms