RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 C14orf105Q9NVL8 296 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 EPDR1Q9UM22 224 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 CYSLTR1Q9Y271 337 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 HS3ST2Q9Y278 367 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 ALPK2Q86TB3 2170 aa0.39□□□□□ -2.35
NUCKS1-202ENST00000464938 ANAPC1Q9H1A4 1944 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 ARFGEF3Q5TH69 2177 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 CCDC88AQ3V6T2 1871 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 ZNF106Q9H2Y7 1883 aaKnown RBP0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 RTL1A6NKG5 1358 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 IGKV2D-26A0A0A0MRZ7 120 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 TMEM114B3SHH9 223 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 UBL3O95164 117 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 OR4E1P0C645 316 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 RAB4BP61018 213 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 RHOGP84095 191 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 CDK10Q15131 360 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 TSNQ15631 228 aaKnown RBP0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 DPPA3Q6W0C5 159 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 FAM19A2Q8N3H0 131 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 MNS1Q8NEH6 495 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 OR51A2Q8NGJ7 313 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 WFDC5Q8TCV5 224 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 DNAJC9Q8WXX5 260 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 OBSCN-AS1Q96MR7 158 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 GINS4Q9BRT9 223 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 TRIM4Q9C037 500 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 OR51V1Q9H2C8 321 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 OSTCQ9NRP0 149 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 GLTPQ9NZD2 209 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 PRELID3BQ9Y3B1 194 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 SNURFQ9Y675 71 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 V9GYY5 206 aaPredicted RBP0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 MUC5BQ9HC84 5762 aaPredicted RBP0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 AHNAKQ09666 5890 aaKnown RBP0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 ECM29Q5VYK3 1845 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 ARHGEF28Q8N1W1 1705 aaKnown RBP0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 RP1P56715 2156 aa0.38□□□□□ -2.35
NUCKS1-202ENST00000464938 hCG_1818297A0A087WSY0 165 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 A0A087X0T9 212 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 TRAV4A0A0B4J268 109 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 C7orf71A4D174 169 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 A8MT66 165 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 INE1O15225 51 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 PDE6DO43924 150 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 HYPMO75409 117 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 E2F6O75461 281 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 SERPINE1P05121 402 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 C8GP07360 202 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 PPIBP23284 216 aaKnown RBP0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 SRIP30626 198 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 CNBPP62633 177 aaKnown RBP0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 FADDQ13158 208 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 DEFB113Q30KQ7 82 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 C1orf137Q5JT78 98 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 Q6Q795 121 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 TRAPPC6BQ86SZ2 158 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 KRT222Q8N1A0 295 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 LINC00471Q8N535 108 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 C3orf56Q8N813 242 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 SFT2D1Q8WV19 159 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 GPR146Q96CH1 333 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 LINC00526Q96FQ7 95 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 CCDC90BQ9GZT6 254 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 PARVBQ9HBI1 364 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 UQCC1Q9NVA1 299 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 NHP2Q9NX24 153 aaKnown RBP0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 UBAP1Q9NZ09 502 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 FBXO5Q9UKT4 447 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 RIMBP3CA6NJZ7 1639 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 RIMBP3BA6NNM3 1639 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 CAMSAP1Q5T5Y3 1602 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 RIMBP3Q9UFD9 1639 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 EXPH5Q8NEV8 1989 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 ADGRL3Q9HAR2 1447 aa0.37□□□□□ -2.35
NUCKS1-202ENST00000464938 MCM3APO60318 1980 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 FAM159BA6NKW6 160 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 J3QRK9 145 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 OR7C1O76099 320 aaPredicted RBP0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 S100A6P06703 90 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 MGST1P10620 155 aaKnown RBP0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 S100A4P26447 101 aaKnown RBP0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 CASP1P29466 404 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 AP3S2P59780 193 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 RNASE10Q5GAN6 216 aaKnown RBP0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 BRMS1LQ5PSV4 323 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 OR8D4Q8NGM9 314 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 PPP1R14BQ96C90 147 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 HIST1H2BLQ99880 126 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 MRPL57Q9BQC6 102 aaKnown RBP0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 TVP23BQ9NYZ1 205 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 KLK9Q9UKQ9 250 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 FMN1Q68DA7 1419 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 PLXND1Q9Y4D7 1925 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 NOTCH1P46531 2555 aa0.36□□□□□ -2.35
NUCKS1-202ENST00000464938 COL1A1P02452 1464 aaPredicted RBP0.35□□□□□ -2.35
NUCKS1-202ENST00000464938 MED12LQ86YW9 2145 aa0.35□□□□□ -2.35
NUCKS1-202ENST00000464938 DENND4CQ5VZ89 1909 aa0.35□□□□□ -2.35
NUCKS1-202ENST00000464938 TRBV19A0A075B6N1 114 aa0.35□□□□□ -2.35
NUCKS1-202ENST00000464938 TRBV6-8A0A0A6YYG3 113 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms