RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TECPR2O15040 1411 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 SMG6Q86US8 1419 aaKnown RBP2.59□□□□□ -1.99
PTCD3-205ENST00000464541 CAMSAP2Q08AD1 1489 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 A0A087X0T9 212 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 A0A0B4J2C4 111 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 LOC102725191A0A1B0GVB3 256 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 ARRDC5A6NEK1 342 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 LEPROTO15243 131 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 NPYP01303 97 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 IFNGP01579 166 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 TSPAN19P0C672 248 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 SDC2P34741 201 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 EVX1P49640 407 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 NCS1P62166 190 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 BIKQ13323 160 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 MSMO1Q15800 293 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 LGALSLQ3ZCW2 172 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-205ENST00000464541 ZNF705AQ6ZN79 300 aaPredicted RBP2.59□□□□□ -1.99
PTCD3-205ENST00000464541 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 SLC30A7Q8NEW0 376 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 OR52R1Q8NGF1 315 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 ARL11Q969Q4 196 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 GINS4Q9BRT9 223 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 OR8D2Q9GZM6 311 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 SMDT1Q9H4I9 107 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 OSTCQ9NRP0 149 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 NAT8Q9UHE5 227 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 NAT8BQ9UHF3 227 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 LOXHD1Q8IVV2 1947 aa2.59□□□□□ -1.99
PTCD3-205ENST00000464541 OVOS2A0A0G2JMS6 1433 aa2.59□□□□□ -2
PTCD3-205ENST00000464541 MYH2Q9UKX2 1941 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 SCN10AQ9Y5Y9 1956 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 TRGV10A0A0A0MS01 117 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 IGKV1D-43A0A0B4J1Z2 117 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 ZNF860A6NHJ4 632 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 TMEM212A6NML5 194 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 ATP6V1G2-DDX39BF2Z307 99 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 GABARAPH6UMI1 98 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 LECT2O14960 151 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 OR2T1O43869 369 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 CREBL2O60519 120 aaPredicted RBP2.58□□□□□ -2
PTCD3-205ENST00000464541 LY6HO94772 140 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 HTR1AP08908 422 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 HLA-DMBP28068 263 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 RRAS2P62070 204 aaPredicted RBP2.58□□□□□ -2
PTCD3-205ENST00000464541 UBE2BP63146 152 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 MRPS10P82664 201 aaKnown RBP2.58□□□□□ -2
PTCD3-205ENST00000464541 HIST1H1AQ02539 215 aaPredicted RBP2.58□□□□□ -2
PTCD3-205ENST00000464541 VMA21Q3ZAQ7 101 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 HCP5Q6MZN7 132 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 MIR17HGQ75NE6 70 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 HIST3H2BBQ8N257 126 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 MMGT1Q8N4V1 131 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 CNEP1R1Q8N9A8 125 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 OR2T10Q8NGZ9 312 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 SCGB3A1Q96QR1 104 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 TP53RKQ96S44 253 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 MIEN1Q9BRT3 115 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 OR5V1Q9UGF6 321 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 HEY1Q9Y5J3 304 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 U3KQK5 164 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 ZNF407Q9C0G0 2248 aa2.58□□□□□ -2
PTCD3-205ENST00000464541 MEIKINA0A087WXM9 373 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 BUB1B-PAK6H3BSN5 160 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 H7BYZ3 331 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 IGHV3-7P01780 117 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 PAEPP09466 180 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 P0DMU3 169 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 FAM231AP0DMU4 169 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 FAM231CP0DMU5 169 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 CCL3P10147 92 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 FABP2P12104 132 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 AQP4P55087 323 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 MYL5Q02045 173 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 EMX2Q04743 252 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 ZNF141Q15928 474 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 MIAQ16674 131 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 LINC01554Q52M75 96 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 TMEM69Q5SWH9 247 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 C4orf22Q6V702 233 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 SDIM1Q6ZPB5 146 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 BPIFA4PQ86YQ2 179 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 OR51A4Q8NGJ6 313 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 HIST1H2BLQ99880 126 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 PRADC1Q9BSG0 188 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 UPK3BQ9BT76 320 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 ADAT1Q9BUB4 502 aaKnown RBP2.57□□□□□ -2
PTCD3-205ENST00000464541 GGACTQ9BVM4 153 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 TMEM133Q9H2Q1 129 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 ERG28Q9UKR5 140 aa2.57□□□□□ -2
PTCD3-205ENST00000464541 TAF1LQ8IZX4 1826 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 CHD5Q8TDI0 1954 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 M0R378 163 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 TCL1BO95988 128 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 IGHV3-53P01767 116 aa2.56□□□□□ -2
PTCD3-205ENST00000464541 NFYAP23511 347 aaPredicted RBP2.56□□□□□ -2
PTCD3-205ENST00000464541 FKBP2P26885 142 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms