RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 OR1L4Q8NGR5 311 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 OCC1Q8TAD7 63 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 FAM210BQ96KR6 192 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 PFDN5Q99471 154 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 RNF2Q99496 336 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 ELOVL1Q9BW60 279 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 LPAR2Q9HBW0 351 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 PRELID1Q9Y255 219 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 ARL2-SNX15V9GYD0 113 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 TRBV24-1A0A075B6N3 115 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 GGTLC3B5MD39 225 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 PYYP10082 97 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 NDPQ00604 133 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 FAM120AOSQ5T036 256 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 PYGO2Q9BRQ0 406 aa8.05□□□□□ -1.12
MSH5-211ENST00000463144 UTP20O75691 2785 aaKnown RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 H7BYZ3 331 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 K7EIM0 57 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 IGLC1P0CG04 106 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 ORM2P19652 201 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 CRYBB3P26998 211 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 CX3CL1P78423 397 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 KLF17Q5JT82 389 aaPredicted RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 LINC00305Q7Z4B0 112 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 ANAPC16Q96DE5 110 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 CCL19Q99731 98 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 TBL2Q9Y4P3 447 aaKnown RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 USP9XQ93008 2570 aaPredicted RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 ABCA2Q9BZC7 2435 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 SPTAN1Q13813 2472 aaKnown RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 IGHV4-61A0A0C4DH41 118 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 A0A1W2PRE2 83 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 NCBP2LA6PVI3 153 aaKnown RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 GOSR1O95249 250 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 RPL35P42766 123 aaKnown RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 GALR1P47211 349 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 SUMO1P63165 101 aaKnown RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 CLEC12BQ2HXU8 276 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 ZNF562Q6V9R5 426 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 PIP4P2Q8N4L2 257 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 FXYD5Q96DB9 178 aa8.04□□□□□ -1.12
MSH5-211ENST00000463144 POLR3KQ9Y2Y1 108 aaPredicted RBP8.04□□□□□ -1.12
MSH5-211ENST00000463144 DOPEY1Q5JWR5 2465 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 ELOA3CA0A087WX78 387 aaPredicted RBP8.03□□□□□ -1.12
MSH5-211ENST00000463144 K7EN84 100 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 TRGC2P03986 189 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 SNRPCP09234 159 aaKnown RBP8.03□□□□□ -1.12
MSH5-211ENST00000463144 TMEM11P17152 192 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 HNF1AP20823 631 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 SAA4P35542 130 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 BPIFB3P59826 476 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 UBE2L3P68036 154 aaKnown RBP8.03□□□□□ -1.12
MSH5-211ENST00000463144 OR1B1Q8NGR6 318 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 C10orf105Q8TEF2 133 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 C22orf15Q8WYQ4 148 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 PAXXQ9BUH6 204 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 OR51M1Q9H341 326 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 CHD6Q8TD26 2715 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 VWC2LB2RUY7 222 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 PHOX2AO14813 284 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 EGR2P11161 476 aaPredicted RBP8.03□□□□□ -1.12
MSH5-211ENST00000463144 PSG1P11464 419 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 PLP1P60201 277 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 TIGITQ495A1 244 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 Q8N9W7 124 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 FAM168AQ92567 244 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 ABCA1O95477 2261 aa8.03□□□□□ -1.12
MSH5-211ENST00000463144 CENPVL3A0A0U1RRI6 287 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 C9JCJ5 164 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 HYPMO75409 117 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 TSPAN9O75954 239 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 IGKV1-17P01599 117 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 S100A6P06703 90 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 CD99P14209 185 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 PAX8Q06710 450 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 ARPC1AQ92747 370 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 PERPQ96FX8 193 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 SFRP2Q96HF1 295 aa8.02□□□□□ -1.13
MSH5-211ENST00000463144 ZFYVE26Q68DK2 2539 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 IGHV7-81A0A0B4J1V7 117 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 NPIPB5A8MRT5 1133 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 UBE2CO00762 179 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 NPFFO15130 113 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 AKR1D1P51857 326 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 SRSF1Q07955 248 aaKnown RBP eCLIP8.01□□□□□ -1.137e-7■■■□□ 15.3
MSH5-211ENST00000463144 OR5B12Q96R08 314 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 CRYBG3Q68DQ2 2970 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 IGLV11-55A0A075B6I3 123 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 IGHV4-30-2A0A087WSY4 118 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 HELTA6NFD8 242 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 AP4M1O00189 453 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 HIST1H2BKO60814 126 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 GGCTO75223 188 aaKnown RBP8.01□□□□□ -1.13
MSH5-211ENST00000463144 HIST1H2BJP06899 126 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 FAM106CPP0CH98 169 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 HIST1H2BOP23527 126 aa8.01□□□□□ -1.13
MSH5-211ENST00000463144 HIST1H2BBP33778 126 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms