RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RAB37Q96AX2 223 aa11.32□□□□□ -0.6
VPS52-212ENST00000445902 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
VPS52-212ENST00000445902 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
VPS52-212ENST00000445902 H3BUT2 72 aa11.32□□□□□ -0.6
VPS52-212ENST00000445902 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
VPS52-212ENST00000445902 RAB30Q15771 203 aa11.32□□□□□ -0.6
VPS52-212ENST00000445902 BPIFA4PQ86YQ2 179 aa11.32□□□□□ -0.6
VPS52-212ENST00000445902 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
VPS52-212ENST00000445902 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
VPS52-212ENST00000445902 NCR2O95944 276 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 IGHV1-2P23083 117 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 RTL8BQ17RB0 113 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 FAM201AQ5SY85 155 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 CHEK1O14757 476 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 BHLHA15Q7RTS1 189 aaPredicted RBP11.31□□□□□ -0.6
VPS52-212ENST00000445902 RND1Q92730 232 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
VPS52-212ENST00000445902 CALYQ9NYX4 217 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 PATE3B3GLJ2 98 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 HLA-DRB1P01911 266 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 PRCDQ00LT1 54 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 C1orf185Q5T7R7 199 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 C10orf113Q5VZT2 155 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 OR2Z1Q8NG97 314 aa11.31□□□□□ -0.6
VPS52-212ENST00000445902 H1FXQ92522 213 aaKnown RBP11.31□□□□□ -0.6
VPS52-212ENST00000445902 RPP21Q9H633 154 aaKnown RBP11.31□□□□□ -0.6
VPS52-212ENST00000445902 TEX50A0A1B0GTY4 177 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 MOSP00540 346 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 LIPFP07098 398 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 KIR2DS2P43631 304 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 TMEM97Q5BJF2 176 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 PATE2Q6UY27 113 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 Q71RC1 249 aaPredicted RBP11.3□□□□□ -0.6
VPS52-212ENST00000445902 ATP5L2Q7Z4Y8 100 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
VPS52-212ENST00000445902 CD69Q07108 199 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 SPRNQ5BIV9 151 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 DUX4L9Q6RFH8 374 aaPredicted RBP11.3□□□□□ -0.6
VPS52-212ENST00000445902 OR1N2Q8NGR9 330 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 ABI3Q9P2A4 366 aa11.3□□□□□ -0.6
VPS52-212ENST00000445902 PGPA6NDG6 321 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 P01737 135 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 C1RLQ9NZP8 487 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
VPS52-212ENST00000445902 COX8AP10176 69 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 PAX2Q02962 417 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 FXYD5Q96DB9 178 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 MRPL32Q9BYC8 188 aaKnown RBP11.29□□□□□ -0.6
VPS52-212ENST00000445902 PRNDQ9UKY0 176 aa11.29□□□□□ -0.6
VPS52-212ENST00000445902 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 MEOX1P50221 254 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 FAM162BQ5T6X4 162 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 ASCL2Q99929 193 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 C19orf24Q9BVV8 132 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 SMG1Q96Q15 3661 aaKnown RBP11.28□□□□□ -0.6
VPS52-212ENST00000445902 INTS1Q8N201 2190 aaKnown RBP11.28□□□□□ -0.6
VPS52-212ENST00000445902 FNDC10F2Z333 226 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 G3V4G9 280 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 ORM2P19652 201 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 CXCL12P48061 93 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 REG1BP48304 166 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 MUC3AQ02505 3323 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 E7EUB6 86 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 K7ESF4 209 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 UPK2O00526 184 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 MGST3O14880 152 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 EPDR1Q9UM22 224 aa11.28□□□□□ -0.6
VPS52-212ENST00000445902 TRAV8-1A0A0A6YYK1 113 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 A8MWL6 223 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 F2RL2O00254 374 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 FXYD7P58549 80 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 GTF2H5Q6ZYL4 71 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 OR8A1Q8NGG7 326 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 MS4A6AQ9H2W1 248 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 ZNF257Q9Y2Q1 563 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 GNG7O60262 68 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 APOHP02749 345 aaPredicted RBP11.27□□□□□ -0.61
VPS52-212ENST00000445902 SP9P0CG40 484 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 SAA1P0DJI8 122 aaPredicted RBP11.27□□□□□ -0.61
VPS52-212ENST00000445902 ACP1P24666 158 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 C17orf58Q2M2W7 97 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 TM4SF20Q53R12 229 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 C2orf83Q53S99 150 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 C10orf55Q5SWW7 151 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 CNEP1R1Q8N9A8 125 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 NCOR1P1Q9H4R4 102 aa11.27□□□□□ -0.61
VPS52-212ENST00000445902 MRPL36Q9P0J6 103 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms