RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 CISD3P0C7P0 127 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 SEC11BP0C7V7 166 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 P2RX1P51575 399 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 RPS23P62266 143 aaKnown RBP8.41□□□□□ -1.06
SYNE2-206ENST00000441438 HBG1P69891 147 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 HBG2P69892 147 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 Q0VG73 95 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 ZNF345Q14585 488 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 DUSP5Q16690 384 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 DEC1Q9P2X7 70 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 KCNE5Q9UJ90 142 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 U3KQE9 123 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 URB1O60287 2271 aaKnown RBP8.41□□□□□ -1.06
SYNE2-206ENST00000441438 TRIAP1O43715 76 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 RNASE12Q5GAN4 147 aaKnown RBP8.4□□□□□ -1.06
SYNE2-206ENST00000441438 KXD1Q9BQD3 176 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 SLC25A21Q9BQT8 299 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-206ENST00000441438 TMEM191AQ9H0A3 160 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 OTORQ9NRC9 128 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 KLF13Q9Y2Y9 288 aaPredicted RBP8.4□□□□□ -1.06
SYNE2-206ENST00000441438 J3QT63 122 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 IGHG2P01859 326 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 H2BFSP57053 126 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 OVOL2Q9BRP0 275 aa8.4□□□□□ -1.06
SYNE2-206ENST00000441438 MT-ND6P03923 174 aa8.4□□□□□ -1.07
SYNE2-206ENST00000441438 SSR2P43308 183 aa8.4□□□□□ -1.07
SYNE2-206ENST00000441438 HERV-K104P61576 105 aa8.4□□□□□ -1.07
SYNE2-206ENST00000441438 FOXI1Q12951 378 aa8.4□□□□□ -1.07
SYNE2-206ENST00000441438 RPS19BP1Q86WX3 136 aaKnown RBP8.4□□□□□ -1.07
SYNE2-206ENST00000441438 LY6G5BQ8NDX9 201 aa8.4□□□□□ -1.07
SYNE2-206ENST00000441438 BORCS8Q96FH0 119 aa8.4□□□□□ -1.07
SYNE2-206ENST00000441438 WASHC3Q9Y3C0 194 aa8.4□□□□□ -1.07
SYNE2-206ENST00000441438 AMMECR1Q9Y4X0 333 aaPredicted RBP8.4□□□□□ -1.07
SYNE2-206ENST00000441438 MUC6Q6W4X9 2439 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 M0R1X1 148 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 HLA-DRB1P01911 266 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 OR9G9P0C7N8 305 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 BEAN1Q3B7T3 259 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 LINC00303Q3SY05 128 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 VMA21Q3ZAQ7 101 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 PVRIGQ6DKI7 326 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 C22orf34Q6ZV56 151 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 PLA2G2FQ9BZM2 168 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 PCDH15Q96QU1 1955 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 GEMIN2O14893 280 aaKnown RBP8.39□□□□□ -1.07
SYNE2-206ENST00000441438 GFERP55789 205 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 ELOCQ15369 112 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 OR7A5Q15622 319 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 CD226Q15762 336 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 ZNF324BQ6AW86 544 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-206ENST00000441438 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 ZNF709Q8N972 641 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 LINC01555Q8NAE3 123 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 NOP16Q9Y3C1 178 aaKnown RBP8.39□□□□□ -1.07
SYNE2-206ENST00000441438 KCNE3Q9Y6H6 103 aa8.39□□□□□ -1.07
SYNE2-206ENST00000441438 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 NEURL1O76050 574 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 RPS4Y1P22090 263 aaKnown RBP8.38□□□□□ -1.07
SYNE2-206ENST00000441438 PPICP45877 212 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 HLA-DRB3P79483 266 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 COL10A1Q03692 680 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 C9orf40Q8IXQ3 194 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 C6orf106Q9H6K1 298 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-206ENST00000441438 FREM2Q5SZK8 3169 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 ASXL3Q9C0F0 2248 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 ZNF860A6NHJ4 632 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 C4orf51C9J302 202 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 NCBP2P52298 156 aaKnown RBP eCLIP8.38□□□□□ -1.07
SYNE2-206ENST00000441438 TMEM131Q92545 1883 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 FXYD6-FXYD2A0A087WZ82 144 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 OOSP1A8MZH6 123 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 PMS2P2O95744 297 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 P0DMU3 169 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 FAM231AP0DMU4 169 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 FAM231CP0DMU5 169 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 SLC25A4P12235 298 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 FAUP35544 74 aaKnown RBP8.38□□□□□ -1.07
SYNE2-206ENST00000441438 C20orf204Q6ZNR8 217 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 FXYD6Q9H0Q3 95 aa8.38□□□□□ -1.07
SYNE2-206ENST00000441438 CPSF4LA6NMK7 179 aaKnown RBP8.37□□□□□ -1.07
SYNE2-206ENST00000441438 H3BP45 60 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 DRD3P35462 400 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 RBMXP38159 391 aaKnown RBP8.37□□□□□ -1.07
SYNE2-206ENST00000441438 ELOBQ15370 118 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 KCTD18Q6PI47 426 aaPredicted RBP8.37□□□□□ -1.07
SYNE2-206ENST00000441438 C10orf126Q8N4M7 172 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 OTOSQ8NHW6 89 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 MPC1Q9Y5U8 109 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 TRAV8-4A0A0B4J246 113 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 NCR2O95944 276 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 ZNF883P0CG24 379 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 PAX8Q06710 450 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 SPATA45Q537H7 98 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 NUP35Q8NFH5 326 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 RPS4Y2Q8TD47 263 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 TTTY10Q9BZA0 68 aa8.37□□□□□ -1.07
SYNE2-206ENST00000441438 LINC01619G3V211 115 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 HMGN2P05204 90 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms