RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 JPT1Q9UK76 154 aa11.17□□□□□ -0.62
LINC02048-201ENST00000440556 PRNDQ9UKY0 176 aa11.17□□□□□ -0.62
LINC02048-201ENST00000440556 BOKQ9UMX3 212 aaPredicted RBP11.17□□□□□ -0.62
LINC02048-201ENST00000440556 MED12LQ86YW9 2145 aa11.17□□□□□ -0.62
LINC02048-201ENST00000440556 MED12Q93074 2177 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 SRRM4A7MD48 611 aaKnown RBP11.16□□□□□ -0.62
LINC02048-201ENST00000440556 OR11H12B2RN74 326 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 MGST3O14880 152 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 SNAI2O43623 268 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 PSPNO60542 156 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 KLF7O75840 302 aaPredicted RBP11.16□□□□□ -0.62
LINC02048-201ENST00000440556 TMEM95Q3KNT9 176 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 ZNF766Q5HY98 468 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 Q6ZS52 159 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 LCNL1Q6ZST4 164 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 OR11H1Q8NG94 326 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 OR11H2Q8NH07 326 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 Q8TCH9 128 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 NANOS1Q8WY41 292 aaKnown RBP11.16□□□□□ -0.62
LINC02048-201ENST00000440556 FMC1Q96HJ9 113 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 MLST8Q9BVC4 326 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 MRPS17Q9Y2R5 130 aaKnown RBP11.16□□□□□ -0.62
LINC02048-201ENST00000440556 A0A096LPE4 126 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 IGHV1OR15-9A0A0B4J2B8 117 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 A0A1W2PPZ6 126 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 CER1O95813 267 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
LINC02048-201ENST00000440556 WDR86Q86TI4 376 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 YRDCQ86U90 279 aaKnown RBP11.16□□□□□ -0.62
LINC02048-201ENST00000440556 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 COQ2Q96H96 371 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 PGLYRP4Q96LB8 373 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 EPDR1Q9UM22 224 aa11.16□□□□□ -0.62
LINC02048-201ENST00000440556 TRAV3A0A0B4J244 114 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 MYCNOSP40205 109 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 FOXE3Q13461 319 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 POU2AF1Q16633 256 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 LTC4SQ16873 150 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
LINC02048-201ENST00000440556 OR5AN1Q8NGI8 311 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 OR1L8Q8NGR8 309 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 RLN3Q8WXF3 142 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 IMMP1LQ96LU5 166 aa11.15□□□□□ -0.62
LINC02048-201ENST00000440556 IGHV1-45A0A0A0MS14 117 aa11.14□□□□□ -0.63
LINC02048-201ENST00000440556 SHISA9B4DS77 424 aa11.14□□□□□ -0.63
LINC02048-201ENST00000440556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.14□□□□□ -0.63
LINC02048-201ENST00000440556 AGFG2O95081 481 aa11.14□□□□□ -0.63
LINC02048-201ENST00000440556 NXPH1P58417 271 aa11.14□□□□□ -0.63
LINC02048-201ENST00000440556 SRSF6Q13247 344 aaKnown RBP11.14□□□□□ -0.63
LINC02048-201ENST00000440556 RIGQ13278 110 aa11.14□□□□□ -0.63
LINC02048-201ENST00000440556 TTC9CQ8N5M4 171 aa11.14□□□□□ -0.63
LINC02048-201ENST00000440556 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.14□□□□□ -0.63
LINC02048-201ENST00000440556 PRSS3P2Q8NHM4 247 aa11.14□□□□□ -0.63
LINC02048-201ENST00000440556 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 NPIPB6E9PJ23 425 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 C15orf65H3BRN8 121 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 TSPAN13O95857 204 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 SRSF1Q07955 248 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC02048-201ENST00000440556 SLC25A48Q6ZT89 311 aaKnown RBP11.13□□□□□ -0.63
LINC02048-201ENST00000440556 ZNF418Q8TF45 676 aaPredicted RBP11.13□□□□□ -0.63
LINC02048-201ENST00000440556 DDB2Q92466 427 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
LINC02048-201ENST00000440556 INSIG2Q9Y5U4 225 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.13□□□□□ -0.63
LINC02048-201ENST00000440556 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 COX7A2P2O60397 106 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 PROP1O75360 226 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 IGHV3-9P01782 118 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 LINC00205P59089 165 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 Q6ZS92 163 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 PPP1R32Q7Z5V6 425 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
LINC02048-201ENST00000440556 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 RAB9BQ9NP90 201 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 CYSLTR1Q9Y271 337 aa11.13□□□□□ -0.63
LINC02048-201ENST00000440556 IGHV3-43A0A0B4J1X8 118 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 PRR33A8MZF0 331 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 E9PLD3 99 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 LTAP01374 205 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 IGHV3-43DP0DP04 118 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 CD69Q07108 199 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 TMEM177Q53S58 311 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 FAM53AQ6NSI3 398 aaPredicted RBP11.12□□□□□ -0.63
LINC02048-201ENST00000440556 FAM90A1Q86YD7 464 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 PDPNQ86YL7 162 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 OR13A1Q8NGR1 328 aa11.12□□□□□ -0.63
LINC02048-201ENST00000440556 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
LINC02048-201ENST00000440556 IGKV1OR2-108A0A075B7D4 117 aa11.11□□□□□ -0.63
LINC02048-201ENST00000440556 hADV38S2A0JD32 116 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms