RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 WDR61Q9GZS3 305 aaKnown RBP8.57□□□□□ -1.04
HMGCL-204ENST00000436439 SH2D7A6NKC9 451 aaPredicted RBP8.56□□□□□ -1.04
HMGCL-204ENST00000436439 PRSS46E5RG02 174 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 CNIH1O95406 144 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 AMY1AP04745 511 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 RNASE2P10153 161 aaKnown RBP8.56□□□□□ -1.04
HMGCL-204ENST00000436439 IGLL1P15814 213 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 CRIP2P52943 208 aaPredicted RBP8.56□□□□□ -1.04
HMGCL-204ENST00000436439 SUB1P53999 127 aaKnown RBP eCLIP8.56□□□□□ -1.04
HMGCL-204ENST00000436439 VWC2Q2TAL6 325 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 ATRAIDQ6UW56 229 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 C10orf99Q6UWK7 81 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 CENPVQ7Z7K6 275 aaPredicted RBP8.56□□□□□ -1.04
HMGCL-204ENST00000436439 OR5AU1Q8NGC0 362 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 TMEM170AQ8WVE7 144 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 ARPC1AQ92747 370 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 TMEM68Q96MH6 324 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 GGACTQ9BVM4 153 aa8.56□□□□□ -1.04
HMGCL-204ENST00000436439 FNDC10F2Z333 226 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 CRYGCP07315 174 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 OR13C7P0DN81 318 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 GNB1P62873 340 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 GUCA2BQ16661 112 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 OR8G2PQ6IF36 304 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 SPSB3Q6PJ21 355 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.55□□□□□ -1.04
HMGCL-204ENST00000436439 EIF5A2Q9GZV4 153 aaKnown RBP8.55□□□□□ -1.04
HMGCL-204ENST00000436439 FBXO7Q9Y3I1 522 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 RFNGQ9Y644 331 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 NOTCH3Q9UM47 2321 aa8.55□□□□□ -1.04
HMGCL-204ENST00000436439 UBE2L5PA0A1B0GUS4 154 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 NPIPB5A8MRT5 1133 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 C9JQL5 133 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
HMGCL-204ENST00000436439 CORTO00230 105 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 SOX15O60248 233 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 MBP02144 154 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 EGR2P11161 476 aaPredicted RBP8.54□□□□□ -1.04
HMGCL-204ENST00000436439 CTRB1P17538 263 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 CD33P20138 364 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 DLK1P80370 383 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 NDPQ00604 133 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 KLK9Q2XQG4 91 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 TMEM41BQ5BJD5 291 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 CTRB2Q6GPI1 263 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 TTC9CQ8N5M4 171 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 WFDC9Q8NEX5 89 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 OR1L6Q8NGR2 347 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 OR1P1Q8NH06 330 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 RNASEH2CQ8TDP1 164 aaKnown RBP8.54□□□□□ -1.04
HMGCL-204ENST00000436439 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 P2RX4Q99571 388 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 HSPB9Q9BQS6 159 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 RSG1Q9BU20 258 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 SLC35B3Q9H1N7 401 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 ZNF580Q9UK33 172 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 KLK9Q9UKQ9 250 aa8.54□□□□□ -1.04
HMGCL-204ENST00000436439 F11RQ9Y624 299 aaKnown RBP8.54□□□□□ -1.04
HMGCL-204ENST00000436439 RBFOX3A6NFN3 312 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 IGHG2P01859 326 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 AREGP15514 252 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 PPT1P50897 306 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 AKIRIN2Q53H80 203 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 ASPHD1Q5U4P2 390 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 SFT2D1Q8WV19 159 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 CACNG8Q8WXS5 425 aa8.53□□□□□ -1.04
HMGCL-204ENST00000436439 TCRBV4S1A1TA0A5B7 111 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 C17orf112F2Z3M2 114 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 K7EIL1 84 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 ATP6V0E1O15342 81 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 MPDU1O75352 247 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 IFNA4P05014 189 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 IGF1P05019 195 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 PF4V1P10720 104 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 FGF7P21781 194 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 GPX4P36969 197 aaPredicted RBP8.52□□□□□ -1.05
HMGCL-204ENST00000436439 PMS2P11Q13670 270 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 C19orf54Q5BKX5 351 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 ZNF506Q5JVG8 444 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 ZNF709Q8N972 641 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 CLRN3Q8NCR9 226 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 RPRMQ9NS64 109 aa8.52□□□□□ -1.05
HMGCL-204ENST00000436439 TSSC4Q9Y5U2 329 aaPredicted RBP8.52□□□□□ -1.05
HMGCL-204ENST00000436439 FAM74A7A6NL05 159 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 TSPAN4O14817 238 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 HSPB1P04792 205 aaKnown RBP8.51□□□□□ -1.05
HMGCL-204ENST00000436439 REG1AP05451 166 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 KRTAP10-11P60412 298 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 CCL20P78556 96 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 CD69Q07108 199 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 FAM74A3Q4VXF1 159 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 KHDC3LQ587J8 217 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 ETFRF1Q6IPR1 90 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 ABHD5Q8WTS1 349 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 RCC1LQ96I51 464 aaKnown RBP8.51□□□□□ -1.05
HMGCL-204ENST00000436439 FAM103A1Q9BTL3 118 aaKnown RBP8.51□□□□□ -1.05
HMGCL-204ENST00000436439 WDR83OSQ9Y284 106 aa8.51□□□□□ -1.05
HMGCL-204ENST00000436439 CYB5BO43169 146 aa8.5□□□□□ -1.05
HMGCL-204ENST00000436439 BRI3O95415 125 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms