RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 IFNA21P01568 189 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 SPART-AS1P0CW21 52 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 AKR1C2P52895 323 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 AP2S1P53680 142 aaPredicted RBP9.67□□□□□ -0.86
LINC00028-201ENST00000435497 PIGPP57054 158 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 DEFB1P60022 68 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 NUTF2P61970 127 aaKnown RBP9.67□□□□□ -0.86
LINC00028-201ENST00000435497 DHODHQ02127 395 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 USF2Q15853 346 aaPredicted RBP9.67□□□□□ -0.86
LINC00028-201ENST00000435497 SP6Q3SY56 376 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 GDF5OSQ5U4N7 250 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 PRSS54Q6PEW0 395 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 LHFPL1Q86WI0 220 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 SCPEP1Q9HB40 452 aa9.67□□□□□ -0.86
LINC00028-201ENST00000435497 SEPSECSQ9HD40 501 aaKnown RBP9.67□□□□□ -0.86
LINC00028-201ENST00000435497 C3orf85A0A1B0GTC6 90 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 BUB3O43684 328 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 NXPH3O95157 252 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 PGAM2P15259 253 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 RCVRNP35243 200 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 EIF2B2P49770 351 aaKnown RBP9.66□□□□□ -0.86
LINC00028-201ENST00000435497 EMP1P54849 157 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
LINC00028-201ENST00000435497 SNX29P2Q8IUI4 249 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 UBE2DNLQ8IWF7 75 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 OR1S2Q8NGQ3 325 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 Q8WTZ3 238 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 ZNF486Q96H40 463 aaPredicted RBP9.66□□□□□ -0.86
LINC00028-201ENST00000435497 FAM210BQ96KR6 192 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 PDCD10Q9BUL8 212 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 COMMD3Q9UBI1 195 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 DKK2Q9UBU2 259 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
LINC00028-201ENST00000435497 OR10J1P30954 320 aa9.65□□□□□ -0.86
LINC00028-201ENST00000435497 RND2P52198 227 aa9.65□□□□□ -0.86
LINC00028-201ENST00000435497 FXYD7P58549 80 aa9.65□□□□□ -0.86
LINC00028-201ENST00000435497 SNRPD3P62318 126 aaKnown RBP9.65□□□□□ -0.86
LINC00028-201ENST00000435497 RNF212Q495C1 297 aa9.65□□□□□ -0.86
LINC00028-201ENST00000435497 AARDQ4LEZ3 155 aa9.65□□□□□ -0.86
LINC00028-201ENST00000435497 TMEM170AQ8WVE7 144 aa9.65□□□□□ -0.86
LINC00028-201ENST00000435497 ENY2Q9NPA8 101 aa9.65□□□□□ -0.86
LINC00028-201ENST00000435497 TMEM189A5PLL7 270 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 SMIM9A6NGZ8 99 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 SCGB2A1O75556 95 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 IGKV3-20P01619 116 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 APOA1P02647 267 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 IL4P05112 153 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 UCP1P25874 307 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 NKX2-1P43699 371 aaPredicted RBP9.64□□□□□ -0.87
LINC00028-201ENST00000435497 SPCS3P61009 180 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 C2orf83Q53S99 150 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 NIPSNAP3BQ9BS92 247 aa9.64□□□□□ -0.87
LINC00028-201ENST00000435497 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
LINC00028-201ENST00000435497 IGHV3OR16-12A0A075B7B8 117 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 ATG12O94817 140 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 ELK1P19419 428 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 HTR2BP41595 481 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 RORCP51449 518 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 TRIM16LQ309B1 348 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 GSG1LQ6UXU4 331 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 SIGLEC15Q6ZMC9 328 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 ZNF709Q8N972 641 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 OR52E5Q8NH55 327 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 RRNAD1Q96FB5 475 aaKnown RBP9.63□□□□□ -0.87
LINC00028-201ENST00000435497 FUNDC2Q9BWH2 189 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 KLK11Q9UBX7 282 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 RFNGQ9Y644 331 aa9.63□□□□□ -0.87
LINC00028-201ENST00000435497 CD3DP04234 171 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 SLC25A4P12235 298 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 VBP1P61758 197 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 NCS1P62166 190 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 TNP2Q05952 138 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 OXA1LQ15070 435 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 SOHLH1Q5JUK2 328 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 MZT2AQ6P582 158 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 C1orf158Q8N1D5 194 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 LHFPL5Q8TAF8 219 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
LINC00028-201ENST00000435497 NPIPB3Q92617 1050 aa9.62□□□□□ -0.87
LINC00028-201ENST00000435497 WDR12Q9GZL7 423 aaKnown RBP9.62□□□□□ -0.87
LINC00028-201ENST00000435497 SAV1Q9H4B6 383 aaPredicted RBP9.62□□□□□ -0.87
LINC00028-201ENST00000435497 HEYLQ9NQ87 328 aaPredicted RBP9.62□□□□□ -0.87
LINC00028-201ENST00000435497 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.62□□□□□ -0.87
LINC00028-201ENST00000435497 DNAH5Q8TE73 4624 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 FAM25AB3EWG3 89 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 FAM25CB3EWG5 89 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 FAM25GB3EWG6 89 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 HPGDSO60760 199 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 CDS2O95674 445 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 TOMM40O96008 361 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 RD3LP0DJH9 198 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 PSG1P11464 419 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 HTN3P15516 51 aa9.61□□□□□ -0.87
LINC00028-201ENST00000435497 RNASE12Q5GAN4 147 aaKnown RBP9.61□□□□□ -0.87
LINC00028-201ENST00000435497 RNASE10Q5GAN6 216 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms