RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 CDK12Q9NYV4 1490 aaPredicted RBP3.19□□□□□ -1.9
PTPN12-206ENST00000435495 GCC2Q8IWJ2 1684 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 UNC13BO14795 1591 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 SHPRHQ149N8 1683 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 TRAV13-1A0A0B4J241 112 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 IGKV1-12A0A0C4DH73 117 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 IGKV1-5P01602 117 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 IGKV1D-12P01611 117 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 BGLAPP02818 100 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 LMO2P25791 158 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 ETV6P41212 452 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 ZNF136P52737 540 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 GNB1P62873 340 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 C9orf66Q5T8R8 295 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 ZNF497Q6ZNH5 498 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 C2orf50Q96LR7 162 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 TBL1YQ9BQ87 522 aa3.19□□□□□ -1.9
PTPN12-206ENST00000435495 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 TMEM256-PLSCR3K7ERE1 68 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 CST7O76096 145 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 IGLC1P0CG04 106 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 NMUP48645 174 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 TMEM183BQ1AE95 376 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 ORMDL2Q53FV1 153 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 COA6Q5JTJ3 125 aaKnown RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 Q6AWC8 147 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 MRPL54Q6P161 138 aaKnown RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 PCP2Q8IVA1 136 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 RNF182Q8N6D2 247 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 ATG5Q9H1Y0 275 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 TUBA4BQ9H853 241 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 DHRS4-AS1Q9P1J3 65 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 CHD3Q12873 2000 aaKnown RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 ASXL1Q8IXJ9 1541 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 KIAA1671Q9BY89 1806 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 IQGAP3Q86VI3 1631 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 TRGV10A0A0A0MS01 117 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 BUB1B-PAK6H3BSN5 160 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 PEX7O00628 323 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 APOC3P02656 99 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 ZNF14P17017 642 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 LGALS3P17931 250 aaKnown RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 CYCSP99999 105 aaKnown RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 AAED1Q7RTV5 226 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 GTSCR1Q86UQ5 136 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 PDPNQ86YL7 162 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 OR4A5Q8NH83 315 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 FAM104AQ969W3 186 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 PYGO2Q9BRQ0 406 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 HDHD3Q9BSH5 251 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-206ENST00000435495 SEC11CQ9BY50 192 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 DPY30Q9C005 99 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 DUSP21Q9H596 190 aa3.18□□□□□ -1.9
PTPN12-206ENST00000435495 E9PCH4 1651 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 SETBP1Q9Y6X0 1596 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 IGLV4-3A0A075B6K6 122 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 IGHV1-45A0A0A0MS14 117 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 TRAV19A0A0A6YYK7 116 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 OR2T8A6NH00 312 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 SLC25A5P05141 298 aaKnown RBP3.17□□□□□ -1.9
PTPN12-206ENST00000435495 PRR4Q16378 134 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 ZNF329Q86UD4 541 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 MAL2Q969L2 176 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 TMEM204Q9BSN7 226 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 VAMP8Q9BV40 100 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 Q9H3A6 140 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 ZNF638Q14966 1978 aaKnown RBP3.17□□□□□ -1.9
PTPN12-206ENST00000435495 POLEQ07864 2286 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 MUC21A0A0G2JKD1 596 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 IRGMA1A4Y4 181 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 KRTAP16-1A8MUX0 517 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-206ENST00000435495 GEMIN2O14893 280 aaKnown RBP3.17□□□□□ -1.9
PTPN12-206ENST00000435495 GABARAPO95166 117 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 TMEM258P61165 79 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 QRFPP83859 136 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 BSPH1Q075Z2 132 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 RSPO1Q2MKA7 263 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-206ENST00000435495 C10orf126Q8N4M7 172 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 OR5H2Q8NGV7 314 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 PLA2G2FQ9BZM2 168 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 DPM3Q9P2X0 92 aa3.17□□□□□ -1.9
PTPN12-206ENST00000435495 XRN1Q8IZH2 1706 aaKnown RBP3.16□□□□□ -1.9
PTPN12-206ENST00000435495 NUP205Q92621 2012 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 RGS12O14924 1447 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 NHSL1Q5SYE7 1610 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 K7ERJ3 54 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 SOCS1O15524 211 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 IGKV1-39P01597 117 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 MT-ND6P03923 174 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 IGKV1D-39P04432 117 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
PTPN12-206ENST00000435495 ZNF883P0CG24 379 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 PYYP10082 97 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 NANOS3P60323 173 aaKnown RBP3.16□□□□□ -1.9
PTPN12-206ENST00000435495 HBBP68871 147 aa3.16□□□□□ -1.9
PTPN12-206ENST00000435495 AADACL3Q5VUY0 350 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms