RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IGHV1-69DA0A0B4J2H0 117 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 IGHV1-69P01742 117 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 RBFOX2O43251 390 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTCH1-207ENST00000429896 CFHR2P36980 270 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 KRTAP27-1Q3LI81 207 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 AQP10Q96PS8 301 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 IGKV1D-8A0A087WSZ0 117 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 NPIPB3Q92617 1050 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 BCL2P10415 239 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 NPPCP23582 126 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 CLEC19AQ6UXS0 136 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 OR4D5Q8NGN0 318 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 FOXA2Q9Y261 457 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-207ENST00000429896 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 OR51M1Q9H341 326 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 LINC00305Q7Z4B0 112 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 SMIM8Q96KF7 97 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 RNF5Q99942 180 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 PGPEP1Q9NXJ5 209 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 IGHV2-70P01814 119 aa10.58□□□□□ -0.72
PTCH1-207ENST00000429896 BDP1A6H8Y1 2624 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 A8MWL6 223 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 IGHV2-5P01817 119 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 LMO1P25800 156 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 SNRPD3P62318 126 aaKnown RBP10.57□□□□□ -0.72
PTCH1-207ENST00000429896 TMEM170BQ5T4T1 132 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 GALNT14Q96FL9 552 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 ERASQ7Z444 233 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 TMEM252Q8N6L7 170 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 TRBV20OR9-2A0A075B6H5 130 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 IGLV3-1P01715 115 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 STAG3L2P0CL84 134 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 HKR1P10072 659 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 LOXP28300 417 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-207ENST00000429896 SRIP30626 198 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 FHITP49789 147 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 ERVK11-1P61568 191 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 ZNF581Q9P0T4 197 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 ZNF407Q9C0G0 2248 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 KIR3DL3Q8N743 410 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 STPG3Q8N7X2 389 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 ST6GALNAC6Q969X2 333 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 WNT10AQ9GZT5 417 aa10.57□□□□□ -0.72
PTCH1-207ENST00000429896 TSPAN13O95857 204 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 DNAJC4Q9NNZ3 241 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 NUP210LQ5VU65 1888 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 CXorf65A6NEN9 183 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 PSG9Q00887 426 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 LINC01587Q99440 93 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 IGHV4-30-2A0A087WSY4 118 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 DUX4L9Q6RFH8 374 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-207ENST00000429896 NCOR1P1Q9H4R4 102 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 TRAV41A0A0B4J266 112 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 FREM3P0C091 2139 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 GPR183P32249 361 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 ICAM4Q14773 271 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 BEND2Q8NDZ0 799 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 COTL1Q14019 142 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 FAM71F2Q6NXP2 309 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 C21orf62Q9NYP8 219 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 KAAG1Q9UBP8 84 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 ALPK2Q86TB3 2170 aa10.56□□□□□ -0.72
PTCH1-207ENST00000429896 COX6CP09669 75 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 DTX2Q86UW9 622 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 C10orf105Q8TEF2 133 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 GAGE10A6NGK3 116 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 TAF15Q92804 592 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTCH1-207ENST00000429896 PEMTQ9UBM1 199 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 RAMP3O60896 148 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 PLP1P60201 277 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 SMAGPQ0VAQ4 97 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 C2orf68Q2NKX9 166 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 OR51G1Q8NGK1 321 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 C8orf46Q8TAG6 207 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 C15orf61A6NNL5 157 aa10.55□□□□□ -0.72
PTCH1-207ENST00000429896 FOXA3P55318 350 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-207ENST00000429896 NDUFA3O95167 84 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 PKIAP61925 76 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 IFI27L2Q9H2X8 130 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 IGHV4-61A0A0C4DH41 118 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 H0YJW9 148 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 FAM209BQ5JX69 171 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 RAB9AP51151 201 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 CUL9Q8IWT3 2517 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
PTCH1-207ENST00000429896 LINC00527Q9UJ94 153 aa10.54□□□□□ -0.72
PTCH1-207ENST00000429896 OR9G9P0C7N8 305 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 GATA2P23769 480 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-207ENST00000429896 Q6ZS49 121 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 NUDT10Q8NFP7 164 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 NUDT11Q96G61 164 aa10.53□□□□□ -0.72
PTCH1-207ENST00000429896 FABP2P12104 132 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms