RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FRMD6-AS1P0C7T7 363 aa11.96□□□□□ -0.5
SYNGAP1-203ENST00000428982 PRSS12P56730 875 aa11.96□□□□□ -0.5
SYNGAP1-203ENST00000428982 SPAG8Q99932 426 aaPredicted RBP11.96□□□□□ -0.5
SYNGAP1-203ENST00000428982 GCHFRP30047 84 aa11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 LYRM7Q5U5X0 104 aa11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 PGPEP1Q9NXJ5 209 aa11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 BCL6BQ8N143 479 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 REG1BP48304 166 aa11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 INO80CQ6PI98 192 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 TMEM131Q92545 1883 aa11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 KIR2DL2P43627 348 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-203ENST00000428982 TPRP12270 2363 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 IGKV1-12A0A0C4DH73 117 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 hADV38S2A0JD32 116 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 C9JCJ5 164 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 IGKV1D-12P01611 117 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 IGHV3-7P01780 117 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 RFPL3SP0C7P2 107 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 REPIN1Q9BWE0 567 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 PRUNE2Q8WUY3 3088 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 OTOGLQ3ZCN5 2332 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 LRP4O75096 1905 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 FCGR2BP31994 310 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 GCSAMLQ5JQS6 135 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 RAB1CQ92928 201 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 IGKV1-27A0A075B6S5 117 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 C5orf63A6NC05 138 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 AP5S1Q9NUS5 200 aa11.94□□□□□ -0.5
SYNGAP1-203ENST00000428982 CUL9Q8IWT3 2517 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 LOC107984156A0A0G2JMH3 177 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 A8MWL6 223 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 H3BMG7 143 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 NGFP01138 241 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 MIC13Q5XKP0 118 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 ARL17AQ8IVW1 177 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 RAX2Q96IS3 184 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 V9GYV3 84 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 NPIPB5A8MRT5 1133 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 Q0VFX4 171 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
SYNGAP1-203ENST00000428982 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 RAB1BQ9H0U4 201 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 C11orf1Q9H5F2 150 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 NGBQ9NPG2 151 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 DLL3Q9NYJ7 618 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 TRBV6-6A0A0A6YYG2 114 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 TMEM189A5PLL7 270 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 SMAD7O15105 426 aaKnown RBP11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 VDAC2P45880 294 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 SPACA3Q8IXA5 215 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 CEP250Q9BV73 2442 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 MPDU1O75352 247 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 TSPAN13O95857 204 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 CA6P23280 308 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 E9PLN8 166 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 SCGB1C2P0DMR2 95 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 HBBP68871 147 aa11.92□□□□□ -0.5
SYNGAP1-203ENST00000428982 IGKV1D-13A0A0B4J2D9 117 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 IGKV1-13P0DP09 117 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 EMP1P54849 157 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 VWC2Q2TAL6 325 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 NEU4Q8WWR8 484 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 ZNF837Q96EG3 531 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 A0A0G2JRQ6 117 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 C2orf70A6NJV1 201 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 GRPP07492 148 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 RASL11AQ6T310 242 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 GNG12Q9UBI6 72 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 TRGV8A0A0C4DH27 118 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 OOEPA6NGQ2 149 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 C5orf47Q569G3 176 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 FGFRL1Q8N441 504 aa11.91□□□□□ -0.5
SYNGAP1-203ENST00000428982 ATP5J2P56134 94 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 H1FXQ92522 213 aaKnown RBP11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 TRBV20-1A0A075B6N2 111 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 A0A1W2PRD5 423 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 A0A1W2PRF3 423 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 A0A1W2PRM7 423 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 ZG16O60844 167 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 KIR3DL3Q8N743 410 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 OR5AN1Q8NGI8 311 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 SPANXB1Q9NS25 103 aaPredicted RBP11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 DEPPQ9NTK1 212 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 MED12Q93074 2177 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 C20orf78Q9BR46 151 aa11.9□□□□□ -0.5
SYNGAP1-203ENST00000428982 INSIG2Q9Y5U4 225 aa11.9□□□□□ -0.51
SYNGAP1-203ENST00000428982 KIAA1549Q9HCM3 1950 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 TIMM8AO60220 97 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 GATA3P23771 443 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 HES1Q14469 280 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 RSPO1Q2MKA7 263 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 UBALD1Q8TB05 177 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
SYNGAP1-203ENST00000428982 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms