RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 GSX1Q9H4S2 264 aaPredicted RBP9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
HMGB3P4-201ENST00000428776 LINC00862A6NCI5 91 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 MFSD2BA6NFX1 497 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 SCGB2A1O75556 95 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 TRGV3P03979 118 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 RNASE1P07998 156 aaKnown RBP9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 IGLC1P0CG04 106 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 FHITP49789 147 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 HILS1P60008 231 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 ATP5G2Q06055 141 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 PXDC1Q5TGL8 231 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 BPIFCQ8NFQ6 507 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 OR10G9Q8NGN4 311 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 MS4A10Q96PG2 267 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 ATP6V0BQ99437 205 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 C19orf24Q9BVV8 132 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 VSIRQ9H7M9 311 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 MED9Q9NWA0 146 aa9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 GAR1Q9NY12 217 aaKnown RBP9.92□□□□□ -0.82
HMGB3P4-201ENST00000428776 TRBV7-1A0A0A6YYK4 115 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 FAM181BA6NEQ2 426 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 INAFM1C9JVW0 142 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 GNG7O60262 68 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 YIF1AO95070 293 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 IGHG4P01861 327 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 H2AFB1P0C5Y9 115 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 PF4V1P10720 104 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 RAB2AP61019 212 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 SLC35B1P78383 322 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZNF90Q03938 601 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZNF616Q08AN1 781 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 Q56UQ5 140 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 Q71RC1 249 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 LYPD6BQ8NI32 183 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 ZNF502Q8TBZ5 544 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 EEF1AKMT3Q96AZ1 226 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 USMG5Q96IX5 58 aa9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 ACTR3CQ9C0K3 210 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P4-201ENST00000428776 A0A0G2JLM5 398 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 NUDT19A8MXV4 375 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 F8W735 103 aaPredicted RBP9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 CRYBA1P05813 215 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 TPPP2P59282 170 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 YPEL3P61236 119 aaPredicted RBP9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 TIGITQ495A1 244 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 RPP25LQ8N5L8 163 aaKnown RBP9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 MBD3L1Q8WWY6 194 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 RCC1LQ96I51 464 aaKnown RBP9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 PFDN2Q9UHV9 154 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 S4R3C0 116 aa9.9□□□□□ -0.82
HMGB3P4-201ENST00000428776 TRAV1-1A0A0B4J248 108 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 CTXND1A0A1B0GTU2 59 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 A0A1W2PPV4 95 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 SEC14L6B5MCN3 397 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 TEX46H3BTG2 121 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 CRLF1O75462 422 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 IGKV1-17P01599 117 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 HBE1P02100 147 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 RD3LP0DJH9 198 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 GATA2P23769 480 aaPredicted RBP9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 RAB9AP51151 201 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 RHOBP62745 196 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 DEFA5Q01523 94 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 TEX38Q6PEX7 206 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 Q6ZSV7 163 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 GATAD1Q8WUU5 269 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 PFDN5Q99471 154 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 RNF2Q99496 336 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 HRH4Q9H3N8 390 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 SERTAD4Q9NUC0 356 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 ZFHX3Q15911 3703 aa9.89□□□□□ -0.83
HMGB3P4-201ENST00000428776 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 PSMB11A5LHX3 300 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 OR2T8A6NH00 312 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 TOMM40O96008 361 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 IGHV3-23P01764 117 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 ELANEP08246 267 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 CTSGP08311 255 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 PSMB8P28062 276 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 CDC34P49427 236 aaPredicted RBP9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 PLP1P60201 277 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 FOXE3Q13461 319 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 ZNF726P1Q15940 193 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 GCSAMLQ5JQS6 135 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 FAM122CQ6P4D5 195 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 ZNF329Q86UD4 541 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 SLC7A5P1Q8MH63 180 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 OR1L4Q8NGR5 311 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 SFT2D1Q8WV19 159 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 RAB24Q969Q5 203 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 CCDC140Q96MF4 163 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 KLK15Q9H2R5 256 aa9.88□□□□□ -0.83
HMGB3P4-201ENST00000428776 DNAJC4Q9NNZ3 241 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms