RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 TREM1Q9NP99 234 aa5.67□□□□□ -1.5
CSTF1-203ENST00000428552 COMMD9Q9P000 198 aa5.67□□□□□ -1.5
CSTF1-203ENST00000428552 MBD2Q9UBB5 411 aa5.67□□□□□ -1.5
CSTF1-203ENST00000428552 XCL2Q9UBD3 114 aa5.67□□□□□ -1.5
CSTF1-203ENST00000428552 DKK2Q9UBU2 259 aa5.67□□□□□ -1.5
CSTF1-203ENST00000428552 OR51B2Q9Y5P1 312 aa5.67□□□□□ -1.5
CSTF1-203ENST00000428552 PUS1Q9Y606 427 aaKnown RBP eCLIP5.67□□□□□ -1.5
CSTF1-203ENST00000428552 PPYP01298 95 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 SPART-AS1P0CW21 52 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 FCGR2CP31995 323 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 FAM222AQ5U5X8 452 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 C8orf59Q8N0T1 100 aaPredicted RBP5.66□□□□□ -1.5
CSTF1-203ENST00000428552 CADM3Q8N126 398 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 DHRSXQ8N5I4 330 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 ZNF114Q8NC26 417 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 STXBP6Q8NFX7 210 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 OR51H1Q8NH63 302 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 RRNAD1Q96FB5 475 aaKnown RBP5.66□□□□□ -1.5
CSTF1-203ENST00000428552 GINS3Q9BRX5 216 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 KRTAP1-5Q9BYS1 174 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 ATG5Q9H1Y0 275 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 TMEM231Q9H6L2 316 aa5.66□□□□□ -1.5
CSTF1-203ENST00000428552 SRRM2Q9UQ35 2752 aaKnown RBP5.65□□□□□ -1.5
CSTF1-203ENST00000428552 METTL21EPA6NDL7 271 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 H3BMM0 161 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 GNG7O60262 68 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 EIF4EP06730 217 aaKnown RBP5.65□□□□□ -1.5
CSTF1-203ENST00000428552 CRYBB3P26998 211 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 GNRHRP30968 328 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 P2RY1P47900 373 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 EMP1P54849 157 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 XGP55808 180 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 OXA1LQ15070 435 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 CDPF1Q6NVV7 123 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 FAM219AQ8IW50 185 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 FCAMRQ8WWV6 532 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 DAZAP1Q96EP5 407 aaKnown RBP5.65□□□□□ -1.5
CSTF1-203ENST00000428552 NIPSNAP3BQ9BS92 247 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 AUNIPQ9H7T9 357 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 MRPL36Q9P0J6 103 aaKnown RBP5.65□□□□□ -1.5
CSTF1-203ENST00000428552 U3KQE9 123 aa5.65□□□□□ -1.5
CSTF1-203ENST00000428552 TRAV1-2A0A0B4J238 106 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 A0A0B4J293 547 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 TMEM50AO95807 157 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 KRASP01116 189 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 HTN3P15516 51 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 ZNF182P17025 639 aaPredicted RBP5.64□□□□□ -1.51
CSTF1-203ENST00000428552 PSMA1P25786 263 aaKnown RBP5.64□□□□□ -1.51
CSTF1-203ENST00000428552 FGF9P31371 208 aaPredicted RBP5.64□□□□□ -1.51
CSTF1-203ENST00000428552 G6PCP35575 357 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 SSTP61278 116 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 CATR1Q13166 79 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 ARL6IP1Q15041 203 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 TRAM1Q15629 374 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 PSMG4Q5JS54 123 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 AADACL3Q5VUY0 350 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 LYPD1Q8N2G4 141 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 PACRGLQ8N7B6 248 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 BEST4Q8NFU0 473 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 RNF167Q9H6Y7 350 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 GPR132Q9UNW8 380 aa5.64□□□□□ -1.51
CSTF1-203ENST00000428552 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 TMEM189A5PLL7 270 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 SMIM9A6NGZ8 99 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 ZNF701M0R085 212 aaPredicted RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 CTDSPLO15194 276 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 PGLYRP1O75594 196 aaPredicted RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 HSMCR30P0CW71 290 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 ANXA7P20073 488 aaKnown RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 NPPCP23582 126 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 F2RP25116 425 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 RANBP1P43487 201 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 LPAR6P43657 344 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 CNN1P51911 297 aaKnown RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 FXYD4P59646 89 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 GNG2P59768 71 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 DEFB1P60022 68 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 MLLT11Q13015 90 aaPredicted RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 GDF5OSQ5U4N7 250 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 TMEM17Q86X19 198 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 HOGA1Q86XE5 327 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 ZNF709Q8N972 641 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 PINX1Q96BK5 328 aaKnown RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 TMEM56Q96MV1 263 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 C1QTNF4Q9BXJ3 329 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 MRPL18Q9H0U6 180 aaKnown RBP5.63□□□□□ -1.51
CSTF1-203ENST00000428552 ACOT13Q9NPJ3 140 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 PRNDQ9UKY0 176 aa5.63□□□□□ -1.51
CSTF1-203ENST00000428552 FAM90A26D6RGX4 464 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 PDCD5O14737 125 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 IGKV1-39P01597 117 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 IGKV1-17P01599 117 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 IGKV1D-39P04432 117 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 FCER2P06734 321 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 HLA-DRB4P13762 266 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 RAB3BP20337 219 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 FXYD7P58549 80 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 ARPC4P59998 168 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 ERVK-16P61578 105 aa5.62□□□□□ -1.51
CSTF1-203ENST00000428552 B2MP61769 119 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms