RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 C19orf54Q5BKX5 351 aa11.83□□□□□ -0.52
GINS3-203ENST00000426538 LYPD6BQ8NI32 183 aa11.83□□□□□ -0.52
GINS3-203ENST00000426538 VN1R17PQ8TDU5 208 aa11.83□□□□□ -0.52
GINS3-203ENST00000426538 MARC2Q969Z3 335 aa11.83□□□□□ -0.52
GINS3-203ENST00000426538 KLK9Q9UKQ9 250 aa11.83□□□□□ -0.52
GINS3-203ENST00000426538 MFSD2BA6NFX1 497 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 SCGB2A1O75556 95 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 YIF1AO95070 293 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 FABP1P07148 127 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 LINC00869P0C866 280 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 PPIFP30405 207 aaKnown RBP11.82□□□□□ -0.52
GINS3-203ENST00000426538 C15orf32Q32M92 178 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 Q56UQ5 140 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 FAM122CQ6P4D5 195 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 RCC1LQ96I51 464 aaKnown RBP11.82□□□□□ -0.52
GINS3-203ENST00000426538 ZNF580Q9UK33 172 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 S4R3C0 116 aa11.82□□□□□ -0.52
GINS3-203ENST00000426538 FLNBO75369 2602 aaKnown RBP11.81□□□□□ -0.52
GINS3-203ENST00000426538 CTXND1A0A1B0GTU2 59 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 A0A1B0GV50 99 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 CDC34P49427 236 aaPredicted RBP11.81□□□□□ -0.52
GINS3-203ENST00000426538 GCSAMLQ5JQS6 135 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 LCN15Q6UWW0 184 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 IL34Q6ZMJ4 242 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 TXN2Q99757 166 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 C19orf24Q9BVV8 132 aa11.81□□□□□ -0.52
GINS3-203ENST00000426538 GSX1Q9H4S2 264 aaPredicted RBP11.81□□□□□ -0.52
GINS3-203ENST00000426538 DNAJC9-AS1A6NH13 148 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 H3BUA1 57 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 TRGV3P03979 118 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 DEFA5Q01523 94 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 ZNF726P1Q15940 193 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 ZNF418Q8TF45 676 aaPredicted RBP11.8□□□□□ -0.52
GINS3-203ENST00000426538 MBD3L1Q8WWY6 194 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 RAB19A4D1S5 217 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 MAP1LC3B2A6NCE7 125 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 FAM223BA6NKX1 122 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 IGHV3-23P01764 117 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 RHOBP62745 196 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 FAM223AQ8IWN6 122 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 COMMD1Q8N668 190 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 OR1L4Q8NGR5 311 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 RAB24Q969Q5 203 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 EEF1AKMT3Q96AZ1 226 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 MAP1LC3BQ9GZQ8 125 aa11.8□□□□□ -0.52
GINS3-203ENST00000426538 GAR1Q9NY12 217 aaKnown RBP11.8□□□□□ -0.52
GINS3-203ENST00000426538 HIVEP2P31629 2446 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 TRAV1-1A0A0B4J248 108 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 SEC14L6B5MCN3 397 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 HMGB3O15347 200 aaKnown RBP11.79□□□□□ -0.52
GINS3-203ENST00000426538 BRI3O95415 125 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 PF4V1P10720 104 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 FCGR2BP31994 310 aaPredicted RBP11.79□□□□□ -0.52
GINS3-203ENST00000426538 TPPP2P59282 170 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 TMEM95Q3KNT9 176 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 TIGITQ495A1 244 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
GINS3-203ENST00000426538 PFDN5Q99471 154 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 ZNF702PQ9H963 129 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 DNAJC4Q9NNZ3 241 aa11.79□□□□□ -0.52
GINS3-203ENST00000426538 TRBV7-1A0A0A6YYK4 115 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 PSG1P11464 419 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 FGF8P55075 233 aaPredicted RBP11.78□□□□□ -0.52
GINS3-203ENST00000426538 FAM78BQ5VT40 261 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 SPSB3Q6PJ21 355 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 SSX7Q7RTT5 188 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 GATAD1Q8WUU5 269 aa11.78□□□□□ -0.52
GINS3-203ENST00000426538 ELOA3CA0A087WX78 387 aaPredicted RBP11.77□□□□□ -0.52
GINS3-203ENST00000426538 FAM181BA6NEQ2 426 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 CLDN34H7C241 214 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 NUPL2O15504 423 aaKnown RBP11.77□□□□□ -0.52
GINS3-203ENST00000426538 IGKV1-17P01599 117 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 IGLV1-40P01703 118 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 CLEC3BP05452 202 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 ORM2P19652 201 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 SLC35B1P78383 322 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 CFHR3Q02985 330 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 ZNF329Q86UD4 541 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.52
GINS3-203ENST00000426538 OR51G1Q8NGK1 321 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 ZNF502Q8TBZ5 544 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 USMG5Q96IX5 58 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 RNF2Q99496 336 aa11.77□□□□□ -0.52
GINS3-203ENST00000426538 SEPSECSQ9HD40 501 aaKnown RBP11.77□□□□□ -0.52
GINS3-203ENST00000426538 EIF3GO75821 320 aaKnown RBP eCLIP11.77□□□□□ -0.53
GINS3-203ENST00000426538 CRYBA1P05813 215 aa11.77□□□□□ -0.53
GINS3-203ENST00000426538 OR5G3P0C626 314 aa11.77□□□□□ -0.53
GINS3-203ENST00000426538 YPEL3P61236 119 aaPredicted RBP11.77□□□□□ -0.53
GINS3-203ENST00000426538 CCL20P78556 96 aa11.77□□□□□ -0.53
GINS3-203ENST00000426538 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.53
GINS3-203ENST00000426538 OR1B1Q8NGR6 318 aa11.77□□□□□ -0.53
GINS3-203ENST00000426538 Q8WTZ3 238 aa11.77□□□□□ -0.53
GINS3-203ENST00000426538 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
GINS3-203ENST00000426538 PBDC1Q9BVG4 233 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms