RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PMCHP20382 165 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 VDAC2P45880 294 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-202ENST00000399804 SFRP2Q96HF1 295 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 ZNF586Q9NXT0 402 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 RABAC1Q9UI14 185 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 TRAV5A0A0B4J249 113 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 A6NNC1 897 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 J3KRW8 73 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 PHOX2AO14813 284 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 RPL7P18124 248 aaKnown RBP11.38□□□□□ -0.59
SCAF4-202ENST00000399804 ATP5G2Q06055 141 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 FAM71F2Q6NXP2 309 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 GOLT1AQ6ZVE7 132 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 HSBP1L1C9JCN9 74 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 ZNF253O75346 499 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 CNTFRP26992 372 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 NCKAP5O14513 1909 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 ZNF137PP52743 207 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 METTL26Q96S19 204 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 USP9YO00507 2555 aaPredicted RBP11.37□□□□□ -0.59
SCAF4-202ENST00000399804 A0A1W2PPI3 338 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 ORM1P02763 201 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 TRGV3P03979 118 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 BRD3OSQ6XYD6 125 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
SCAF4-202ENST00000399804 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 AMY1AP04745 511 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 BMI1P35226 326 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 C5orf64Q2M2E5 130 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 WFDC3Q8IUB2 231 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 PLA2G2EQ9NZK7 142 aa11.37□□□□□ -0.59
SCAF4-202ENST00000399804 C22orf46C9J442 243 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 TPPP2P59282 170 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 KRTDAPP60985 99 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 CX3CL1P78423 397 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 BEND2Q8NDZ0 799 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 RNF5Q99942 180 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 NAGKQ9UJ70 344 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 CGB1A6NKQ9 187 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 SLC17A3O00476 420 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 ZNF207O43670 478 aaKnown RBP11.36□□□□□ -0.59
SCAF4-202ENST00000399804 MINOS1Q5TGZ0 78 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 TMEM219Q86XT9 240 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 GBGT1Q8N5D6 347 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 LINC00311Q8N616 119 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 MINOS1-NBL1R4GNA1 71 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 KIAA1549Q9HCM3 1950 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 DYSFO75923 2080 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 A8MWL6 223 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 UBE2CO00762 179 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 EEF1AKMT3Q96AZ1 226 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 GPR61Q9BZJ8 451 aa11.36□□□□□ -0.59
SCAF4-202ENST00000399804 A0A1B0GW64 132 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 ARL3P36405 182 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 BATFQ16520 125 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 TPSG1Q9NRR2 321 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 PLXNB1O43157 2135 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 EYSQ5T1H1 3165 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 IGHV3-66A0A0C4DH42 116 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 C20orf202A1L168 122 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 COX19Q49B96 90 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 CLEC19AQ6UXS0 136 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 C5orf30Q96GV9 206 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
SCAF4-202ENST00000399804 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
SCAF4-202ENST00000399804 A0A087WWC5 75 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 KIR3DL3Q8N743 410 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 NOL4LQ96MY1 436 aaPredicted RBP11.34□□□□□ -0.59
SCAF4-202ENST00000399804 TUBA4BQ9H853 241 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 OOSP1A8MZH6 123 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 PEX7O00628 323 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 NPPCP23582 126 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 DLX6P56179 175 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
SCAF4-202ENST00000399804 C5orf17Q8NAS9 161 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 IGHV2-70P01814 119 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 SAA4P35542 130 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 AMTP48728 403 aa11.34□□□□□ -0.59
SCAF4-202ENST00000399804 F11RQ9Y624 299 aaKnown RBP11.34□□□□□ -0.59
SCAF4-202ENST00000399804 SMAD7O15105 426 aaKnown RBP11.33□□□□□ -0.59
SCAF4-202ENST00000399804 PSG1P11464 419 aa11.33□□□□□ -0.59
SCAF4-202ENST00000399804 RHOGP84095 191 aa11.33□□□□□ -0.59
SCAF4-202ENST00000399804 ZNF600Q6ZNG1 722 aa11.33□□□□□ -0.59
SCAF4-202ENST00000399804 RNF125Q96EQ8 232 aa11.33□□□□□ -0.59
SCAF4-202ENST00000399804 MYO9AB2RTY4 2548 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 TRGC1P0CF51 173 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 C16orf92Q96LL3 132 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 CHD3Q12873 2000 aaKnown RBP11.33□□□□□ -0.6
SCAF4-202ENST00000399804 CSN3P07498 182 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 FBXL19-AS1Q494R0 122 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 GFI1BQ5VTD9 330 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 DERL1Q9BUN8 251 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 ARHGAP21Q5T5U3 1957 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 A0A1W2PRE2 83 aa11.33□□□□□ -0.6
SCAF4-202ENST00000399804 SH2D7A6NKC9 451 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms