RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 CNTFRP26992 372 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 SSBP4Q9BWG4 385 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 H2BFSP57053 126 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 FAM90A26D6RGX4 464 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 ZNF600Q6ZNG1 722 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 IGHV3-16A0A0C4DH30 117 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 NPIPB13A6NJU9 1138 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 NPIPB5A8MRT5 1133 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 YPEL1O60688 119 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 YPEL2Q96QA6 119 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 PSPNO60542 156 aa11.37□□□□□ -0.59
CACNA1C-211ENST00000399617 CDX1P47902 265 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 ZNF581Q9P0T4 197 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 AGAP20933 346 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 CACNA1EQ15878 2313 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 SHISA3A0PJX4 238 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 OVOL3O00110 214 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 TRAF4Q9BUZ4 470 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 RNASE7Q9H1E1 156 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 NXT2Q9NPJ8 142 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 PTPRFP10586 1907 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 KNCNA6PVL3 124 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 PAX1P15863 534 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 SCRT1Q9BWW7 348 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 EXOC3-AS1Q8N2X6 119 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 SIPA1L1O43166 1804 aa11.36□□□□□ -0.59
CACNA1C-211ENST00000399617 DEFB131AP59861 70 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 COX19Q49B96 90 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 NABP1Q96AH0 204 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 PMCHL2Q9BQD1 86 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 PRADC1Q9BSG0 188 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 RTBDNQ9BSG5 229 aaPredicted RBP11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 CD8AP01732 235 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 DOCK10Q96BY6 2186 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 BUB1B-PAK6H3BSN5 160 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 TDGF1P3P51864 188 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 HIST2H2BCQ6DN03 193 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 DOCK7Q96N67 2140 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 DNAL4O96015 105 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 FAM169BQ8N8A8 192 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 TM2D1Q9BX74 207 aa11.35□□□□□ -0.59
CACNA1C-211ENST00000399617 CD28P10747 220 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 IGKV1-12A0A0C4DH73 117 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 C15orf61A6NNL5 157 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 IGKV1D-12P01611 117 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 ST20Q9HBF5 79 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 CLPSP04118 112 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 LINC00114Q6XXX2 140 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 RNF144BQ7Z419 303 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 Q8TAT8 98 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 REG4Q9BYZ8 158 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 A0A0A6YYD4 124 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 DTX2Q86UW9 622 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 PMS2P5A8MQ11 134 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 HBBP68871 147 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 TMEM136Q6ZRR5 245 aa11.34□□□□□ -0.59
CACNA1C-211ENST00000399617 IGKV1D-8A0A087WSZ0 117 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 LINC00271P0C7V0 271 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 NBL1P41271 181 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 ZNF324BQ6AW86 544 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 OR10AG1Q8NH19 301 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 ANKRD36A6QL64 1941 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 IFITM3Q01628 133 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 G3V318 75 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 C2orf68Q2NKX9 166 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 FAM120AOSQ5T036 256 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 ARID2Q68CP9 1835 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 IGKV1-27A0A075B6S5 117 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 ATP5LO75964 103 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 PMCHL1Q16048 86 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 SEC16AO15027 2179 aa11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-211ENST00000399617 SOD3P08294 240 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 ERCC8Q13216 396 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 OR1P1Q8NH06 330 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 CRYGSP22914 178 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 WT1P19544 449 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 UCP3P55916 312 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 LINC00158P58513 81 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 VCX2Q9H322 139 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 DICER1Q9UPY3 1922 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 DUTP33316 252 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 ZNF506Q5JVG8 444 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 TRBV6-7A0A0A0MS04 114 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 PGPEP1LA6NFU8 196 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 H3BRM9 83 aa11.32□□□□□ -0.6
CACNA1C-211ENST00000399617 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms