RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 CD226Q15762 336 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 AADACL3Q5VUY0 350 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 SLC25A33Q9BSK2 321 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 A0A0U1RQV1 116 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 CXorf1O96002 111 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 SLC25A30Q5SVS4 291 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 CBLN3Q6UW01 205 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 ZNF714Q96N38 554 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 DOCK7Q96N67 2140 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 HSD17B10Q99714 261 aaKnown RBP6.71□□□□□ -1.34
LIMS1-203ENST00000393310 SOSTQ9BQB4 213 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 DCAF13Q9NV06 445 aaKnown RBP6.71□□□□□ -1.34
LIMS1-203ENST00000393310 LAMTOR3Q9UHA4 124 aa6.71□□□□□ -1.34
LIMS1-203ENST00000393310 USP9YO00507 2555 aaPredicted RBP6.71□□□□□ -1.34
LIMS1-203ENST00000393310 H3BUX3 64 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 CA6P23280 308 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 REG1BP48304 166 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 FNDC7Q5VTL7 733 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 PRO0628Q9UI54 55 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 KIR2DL5BA0A0G2JN68 375 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 KIR2DL5BA0A0G2JPC4 375 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 WIPF1O43516 503 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 MOSP00540 346 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 PIPP12273 146 aaPredicted RBP6.7□□□□□ -1.34
LIMS1-203ENST00000393310 HERVK_113P61574 105 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 ERVK-16P61578 105 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 FABP5Q01469 135 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 PAGE3Q5JUK9 113 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 GGNQ86UU5 652 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 KIR2DL5AQ8N109 375 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 GPR84Q9NQS5 396 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 PLPP3O14495 311 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 SEC11BP0C7V7 166 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 HLA-DOBP13765 273 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 MDKP21741 143 aaPredicted RBP6.7□□□□□ -1.34
LIMS1-203ENST00000393310 GSTO2Q9H4Y5 243 aa6.7□□□□□ -1.34
LIMS1-203ENST00000393310 TRDV1A0A1B0GX56 115 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 LYNX1G3V0Z9 82 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 LYNX1P0DP58 116 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 UTF1Q5T230 341 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 U3KQK5 164 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 TMEM250H0YL14 139 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 K7EP34 96 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 CGAP01215 116 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 NKX2-1P43699 371 aaPredicted RBP6.69□□□□□ -1.34
LIMS1-203ENST00000393310 ZNF79Q15937 498 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 MS4A18Q3C1V0 323 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 NDUFS7O75251 213 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 PPP1R3DO95685 299 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 GPX1P07203 203 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 SLC25A1P53007 311 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 COL10A1Q03692 680 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 SAMD5Q5TGI4 173 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 PRSS54Q6PEW0 395 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 SMIM8Q96KF7 97 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 TEX37Q96LM6 180 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 CHD6Q8TD26 2715 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 DHRS3O75911 302 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 EGR1P18146 543 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 RPL18Q07020 188 aaKnown RBP6.69□□□□□ -1.34
LIMS1-203ENST00000393310 VMA21Q3ZAQ7 101 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 CDPF1Q6NVV7 123 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 OR4C16Q8NGL9 310 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 PRNDQ9UKY0 176 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 PLCE1Q9P212 2302 aa6.69□□□□□ -1.34
LIMS1-203ENST00000393310 TRAV9-2A0A087WT02 112 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 FCGR2CP31995 323 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 CSN1S1P47710 185 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 IMMP2LQ96T52 175 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 DNAJC15Q9Y5T4 150 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 LOC107984156A0A0G2JMH3 177 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 F8W1H4 67 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 RRHO14718 337 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 SFT2D2O95562 160 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 RPL35AP18077 110 aaKnown RBP6.68□□□□□ -1.34
LIMS1-203ENST00000393310 BLVRBP30043 206 aaPredicted RBP6.68□□□□□ -1.34
LIMS1-203ENST00000393310 UBE2E1P51965 193 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 RUNX1Q01196 453 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 ARL17AQ8IVW1 177 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 RIMKLAQ8IXN7 391 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 TTC9CQ8N5M4 171 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 OR5AK2Q8NH90 309 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 KCNS1Q96KK3 526 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 ZNF488Q96MN9 340 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 ENPP4Q9Y6X5 453 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 COL8A2P25067 703 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 B3GALT5-AS1P59052 145 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 TMEM258P61165 79 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 RTL8BQ17RB0 113 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 DGAT2L6Q6ZPD8 337 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 FAM90A1Q86YD7 464 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 LINC00482Q8N8I6 264 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 CFHR4Q92496 578 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 MOB4Q9Y3A3 225 aa6.68□□□□□ -1.34
LIMS1-203ENST00000393310 H3BSH0 61 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 IGHV1-46P01743 117 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 DEFA4P12838 97 aa6.67□□□□□ -1.34
LIMS1-203ENST00000393310 VWC2Q2TAL6 325 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms