RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 TAAR5O14804 337 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 TAX1BP3O14907 124 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 CREBL2O60519 120 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 UBL3O95164 117 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 CDS2O95674 445 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 SOD1P00441 154 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 PTHP01270 115 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 IGHV3-11P01762 117 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 IGHG2P01859 326 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 MAS1P04201 325 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 HLA-DQB2P05538 268 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 TRGC1P0CF51 173 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF286BP0CG31 522 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 PET100P0DJ07 73 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 TPT1P13693 172 aaKnown RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 CD99P14209 185 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 PMCHP20382 165 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 SULT1A2P50226 295 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 POLR2HP52434 150 aaKnown RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 AKR1C2P52895 323 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 CLDN6P56747 220 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 H2BFSP57053 126 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 SLC35B1P78383 322 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 LCN2P80188 198 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 MEF2BQ02080 365 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 Q0VG73 95 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF816Q0VGE8 651 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 ST3GAL4Q11206 333 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 KLRD1Q13241 179 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 PAFAH1B3Q15102 231 aaKnown RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 OR8B8Q15620 311 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 GLYATL3Q5SZD4 288 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 CLEC20AQ6ZU45 233 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 GKN2Q86XP6 184 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 C1orf174Q8IYL3 243 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF567Q8N184 647 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 UMODL1-AS1Q8N2C9 162 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM256Q8N2U0 113 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 SMIM20Q8N5G0 67 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 TTC9CQ8N5M4 171 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF709Q8N972 641 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF439Q8NDP4 499 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 OR51T1Q8NGJ9 327 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 Q8WTZ3 238 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 IMP4Q96G21 291 aaKnown RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 BTF3L4Q96K17 158 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 KCNS1Q96KK3 526 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 SCGB3A2Q96PL1 93 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 CIB3Q96Q77 187 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 CDX2Q99626 313 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 HSPB9Q9BQS6 159 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 SLC25A21Q9BQT8 299 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-205ENST00000391970 COA1Q9GZY4 146 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 FAM206AQ9NX38 181 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 PRO0628Q9UI54 55 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 HSPB8Q9UJY1 196 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF835Q9Y2P0 537 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 HES2Q9Y543 173 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 IER3IP1Q9Y5U9 82 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 USP24Q9UPU5 2620 aa1.79□□□□□ -2.12
PTPRC-205ENST00000391970 NUP214P35658 2090 aaPredicted RBP1.78□□□□□ -2.12
PTPRC-205ENST00000391970 NLRC5Q86WI3 1866 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 COL4A4P53420 1690 aaPredicted RBP1.78□□□□□ -2.12
PTPRC-205ENST00000391970 THSD7AQ9UPZ6 1657 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SSC5DA1L4H1 1573 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 DSPPQ9NZW4 1301 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 IGKV1-27A0A075B6S5 117 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 A0A0B4J2E0 115 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 IGHV7-4-1A0A0J9YVY3 117 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 A0A1B0GX12 115 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TRDV1A0A1B0GX56 115 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 KANTRA0A1W2PQU2 76 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 A0A1W2PRF3 423 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 A0A1W2PRM7 423 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM212A6NML5 194 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 FABP5P3A8MUU1 101 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 GABARAPH6UMI1 98 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 J3QR89 54 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 K7EP34 96 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 DEGS1O15121 323 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ALOX12BO75342 701 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 PROSCO94903 275 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 NDUFB6O95139 128 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 CDRT1O95170 752 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 CNIH1O95406 144 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 NCR2O95944 276 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TNFP01375 233 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 IGLV3-25P01717 112 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 KLK1P06870 262 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SCTP09683 121 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 SEC11BP0C7V7 166 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF728P0DKX0 622 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 CDK2P24941 298 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TSPOP30536 169 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 S100A7P31151 101 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 PRSS3P35030 304 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 REG1BP48304 166 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 MARCKSL1P49006 195 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 STC1P52823 247 aa1.78□□□□□ -2.12
PTPRC-205ENST00000391970 TCL1AP56279 114 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms