RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 IGKV2-40A0A087WW87 121 aaPredicted RBP11.95□□□□□ -0.5
PSME4-201ENST00000389993 IGKV2D-40P01614 121 aaPredicted RBP11.95□□□□□ -0.5
PSME4-201ENST00000389993 OBSL1O75147 1896 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 KIAA1549LQ6ZVL6 1849 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 GTF3C1Q12789 2109 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 SOD3P08294 240 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 GFI1BQ5VTD9 330 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 FAM159AQ6UWV7 190 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 IL17RELQ6ZVW7 336 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 SEPSECSQ9HD40 501 aaKnown RBP11.95□□□□□ -0.5
PSME4-201ENST00000389993 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.55e-7■■■■□ 26.6
PSME4-201ENST00000389993 VDAC2P45880 294 aaPredicted RBP11.95□□□□□ -0.5
PSME4-201ENST00000389993 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 ZNF324O75467 553 aaPredicted RBP11.95□□□□□ -0.5
PSME4-201ENST00000389993 GCGP01275 180 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 COMPP49747 757 aaPredicted RBP11.95□□□□□ -0.5
PSME4-201ENST00000389993 ID3Q02535 119 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 LIME1Q9H400 295 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 H3BUX3 64 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 NDUFS7O75251 213 aa11.95□□□□□ -0.5
PSME4-201ENST00000389993 SNRPD3P62318 126 aaKnown RBP11.94□□□□□ -0.5
PSME4-201ENST00000389993 CYTL1Q9NRR1 136 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 IGKV3D-20A0A0C4DH25 116 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 UBE2L6O14933 153 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
PSME4-201ENST00000389993 DIAPH2-AS1Q14236 149 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 GCSHP23434 173 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 MGST2Q99735 147 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 M0R3E3 92 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 EVI2AP22794 236 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 ERASQ7Z444 233 aa11.94□□□□□ -0.5
PSME4-201ENST00000389993 ZNF98A6NK75 572 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 LEPROTL1O95214 131 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 RNF125Q96EQ8 232 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 RAX2Q96IS3 184 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 PMS2P5A8MQ11 134 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 HIGD1CA8MV81 97 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 AREGP15514 252 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 C15orf32Q32M92 178 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 DUX3Q96PT4 197 aa11.93□□□□□ -0.5
PSME4-201ENST00000389993 H0YJW9 148 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 C5orf52A6NGY3 159 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 RIPPLY3P57055 190 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 BET1LQ9NYM9 111 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 ZMAT5Q9UDW3 170 aaKnown RBP11.92□□□□□ -0.5
PSME4-201ENST00000389993 A8MXK9 166 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 DTX1Q86Y01 620 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 KCNS1Q96KK3 526 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 FAM215AQ9Y5M1 114 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 TTC28Q96AY4 2481 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 MMP23AO75900 390 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 TMEM144Q7Z5S9 345 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 TECTAO75443 2155 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 EFNA4P52798 201 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 SMDT1Q9H4I9 107 aa11.92□□□□□ -0.5
PSME4-201ENST00000389993 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.91□□□□□ -0.5
PSME4-201ENST00000389993 TPTE2P1Q5T6R2 138 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 AMMECR1LQ6DCA0 310 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 IGHV3-73A0A0B4J1V6 119 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 BUB1B-PAK6H3BSN5 160 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 HEPN1Q6WQI6 88 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 SYT8Q8NBV8 401 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
PSME4-201ENST00000389993 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 SDF2L1Q9HCN8 221 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 TCRBV4S1A1TA0A5B7 111 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 TMEM160Q9NX00 188 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 PSG1P11464 419 aa11.91□□□□□ -0.5
PSME4-201ENST00000389993 CEACAM4O75871 244 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 LCNL1Q6ZST4 164 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 LINC01587Q99440 93 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 ADMP35318 185 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 Q8TAT8 98 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 GGTLC1Q9BX51 225 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 DOPEY2Q9Y3R5 2298 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 M0R143 59 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 NMSQ5H8A3 153 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 FOXL2NBQ6ZUU3 175 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 NUP37Q8NFH4 326 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 C14orf144Q96I85 54 aa11.9□□□□□ -0.5
PSME4-201ENST00000389993 SP5Q6BEB4 398 aaPredicted RBP11.9□□□□□ -0.5
PSME4-201ENST00000389993 TRAV8-1A0A0A6YYK1 113 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 HBBP68871 147 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 SLC25A48Q6ZT89 311 aaKnown RBP11.89□□□□□ -0.51
PSME4-201ENST00000389993 NRGNQ92686 78 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 ZNF256Q9Y2P7 627 aaPredicted RBP11.89□□□□□ -0.51
PSME4-201ENST00000389993 HLA-DQA1P01909 254 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 SAA4P35542 130 aa11.89□□□□□ -0.51
PSME4-201ENST00000389993 MED13Q9UHV7 2174 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms