RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MGST2Q99735 147 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 HSPB7Q9UBY9 170 aa6.56□□□□□ -1.36
CKAP2-203ENST00000378037 PIGBOS1A0A0B4J2F0 54 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 A0A1W2PPI3 338 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 HELTA6NFD8 242 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 UPK2O00526 184 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 CBLN1P23435 193 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 CFPP27918 469 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 TAS2R45P59539 299 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 WT1-ASQ06250 92 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 ICAM4Q14773 271 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 ZNF726P1Q15940 193 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 KRTAP27-1Q3LI81 207 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 GOLT1AQ6ZVE7 132 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 PDPNQ86YL7 162 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 OR5B3Q8NH48 314 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 MIOXQ9UGB7 285 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 DNASE2O00115 360 aaPredicted RBP6.55□□□□□ -1.36
CKAP2-203ENST00000378037 PHOX2AO14813 284 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 ZFP36P26651 326 aaKnown RBP6.55□□□□□ -1.36
CKAP2-203ENST00000378037 COMMD1Q8N668 190 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 ASB13Q8WXK3 278 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 TMEM186Q96B77 213 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 DUX3Q96PT4 197 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 GPR61Q9BZJ8 451 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 NUDT19A8MXV4 375 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 SEC14L6B5MCN3 397 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 H3BUX3 64 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 CLDN34H7C241 214 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 RBFOX2O43251 390 aaKnown RBP eCLIP6.55□□□□□ -1.36
CKAP2-203ENST00000378037 RAB5AP20339 215 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 MORN5Q5VZ52 161 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 DHRS7BQ6IAN0 325 aaPredicted RBP6.55□□□□□ -1.36
CKAP2-203ENST00000378037 NEU1Q99519 415 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 SCRT1Q9BWW7 348 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 GGTLC1Q9BX51 225 aa6.55□□□□□ -1.36
CKAP2-203ENST00000378037 ZNF98A6NK75 572 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 LY86O95711 162 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 MBP02144 154 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 SRP19P09132 144 aaKnown RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 USF1P22415 310 aaPredicted RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 EFNB3Q15768 340 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 MMD2Q8IY49 270 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 C1orf174Q8IYL3 243 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 ARL6IP6Q8N6S5 226 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 CLDND2Q8NHS1 167 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 MRPL36Q9P0J6 103 aaKnown RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 BTBD17A6NE02 478 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 LMO1P25800 156 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 CX3CL1P78423 397 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 HLA-DRB5Q30154 266 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 C15orf54Q8N8G6 183 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 LRTM2Q8N967 370 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 SSBP4Q9BWG4 385 aaPredicted RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 TUBG2Q9NRH3 451 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 BEX4Q9NWD9 120 aaPredicted RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 IGHV4-61A0A0C4DH41 118 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 BRS3P32247 399 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 DEFB1P60022 68 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 PAX5Q02548 391 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 GUSBP1Q15486 140 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 SLC25A48Q6ZT89 311 aaKnown RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 DMRTC2Q8IXT2 367 aaPredicted RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 PARD6GQ9BYG4 376 aaPredicted RBP6.54□□□□□ -1.36
CKAP2-203ENST00000378037 FBXL7Q9UJT9 491 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 ANAPC10Q9UM13 185 aa6.54□□□□□ -1.36
CKAP2-203ENST00000378037 IGHV3OR16-12A0A075B7B8 117 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 BUB1B-PAK6H3BSN5 160 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 HYPMO75409 117 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 CXCL1P09341 107 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 GCHFRP30047 84 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 CNN1P51911 297 aaKnown RBP6.53□□□□□ -1.36
CKAP2-203ENST00000378037 TPPP2P59282 170 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 KRTDAPP60985 99 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 IL15RAQ13261 267 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 KCNIP4Q6PIL6 250 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 Q8TAT8 98 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 Q8WTZ3 238 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 HIST1H2BAQ96A08 127 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 DNAJC4Q9NNZ3 241 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 FKBP11Q9NYL4 201 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 SLC45A2Q9UMX9 530 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 TRAPPC1Q9Y5R8 145 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 IGHV4-30-2A0A087WSY4 118 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 MFAP2P55001 183 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 CENPWQ5EE01 88 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 SPSB3Q6PJ21 355 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 UQCC3Q6UW78 93 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 STXBP6Q8NFX7 210 aa6.53□□□□□ -1.36
CKAP2-203ENST00000378037 AMMECR1Q9Y4X0 333 aaPredicted RBP6.53□□□□□ -1.36
CKAP2-203ENST00000378037 LOC389332A0A1B0GUA5 103 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 DUXBA0A1W2PPF3 345 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 SNURFLB1AK76 121 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 ORM1P02763 201 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 MC5RP33032 325 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 KIR2DS2P43631 304 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 SERF2P84101 59 aa6.52□□□□□ -1.36
CKAP2-203ENST00000378037 PMS2P11Q13670 270 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms