RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PAXXQ9BUH6 204 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 SLC45A2Q9UMX9 530 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 PCSK5Q92824 1860 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 KHDC1LQ5JSQ8 128 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 MBNL2Q5VZF2 373 aaKnown RBP9.53□□□□□ -0.88
DDR1-227ENST00000376570 YTHDF2Q9Y5A9 579 aaKnown RBP9.53□□□□□ -0.88
DDR1-227ENST00000376570 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.88
DDR1-227ENST00000376570 YPEL1O60688 119 aa9.52□□□□□ -0.88
DDR1-227ENST00000376570 PCP4P48539 62 aa9.52□□□□□ -0.88
DDR1-227ENST00000376570 PTTG1IPP53801 180 aa9.52□□□□□ -0.88
DDR1-227ENST00000376570 YPEL2Q96QA6 119 aa9.52□□□□□ -0.88
DDR1-227ENST00000376570 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.88
DDR1-227ENST00000376570 RPUSD1Q9UJJ7 312 aaKnown RBP9.52□□□□□ -0.88
DDR1-227ENST00000376570 DIRC3C9JPN6 131 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 E7EUB6 86 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 SIAH2O43255 324 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 RPLP1P05386 114 aaKnown RBP9.52□□□□□ -0.89
DDR1-227ENST00000376570 TMEM183BQ1AE95 376 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 LINC00305Q7Z4B0 112 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 RAB1CQ92928 201 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 RAB1BQ9H0U4 201 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 RBFOX2O43251 390 aaKnown RBP eCLIP9.52□□□□□ -0.89
DDR1-227ENST00000376570 GNG7O60262 68 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 SERF1AO75920 110 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 S100A7P31151 101 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 FCGR2BP31994 310 aaPredicted RBP9.52□□□□□ -0.89
DDR1-227ENST00000376570 PRRX1P54821 245 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 NOL4LQ96MY1 436 aaPredicted RBP9.52□□□□□ -0.89
DDR1-227ENST00000376570 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 WASHC3Q9Y3C0 194 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 TIMM9Q9Y5J7 89 aa9.52□□□□□ -0.89
DDR1-227ENST00000376570 C15orf61A6NNL5 157 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 HLA-DRB5Q30154 266 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 PDPNQ86YL7 162 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 OR4C13Q8NGP0 309 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 FOXA2Q9Y261 457 aaPredicted RBP9.51□□□□□ -0.89
DDR1-227ENST00000376570 DOPEY1Q5JWR5 2465 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 GCGP01275 180 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 FRMD6-AS1P0C7T7 363 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 ADMP35318 185 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 UQCRFS1P47985 274 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 TMEM219Q86XT9 240 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 ADTRPQ96IZ2 230 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 SNHG12Q9BXW3 62 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 WDR83OSQ9Y284 106 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 ADAMTS20P59510 1910 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 TMEM178BH3BS89 294 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 TIMM23O14925 209 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 OR2J3O76001 311 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 APOBEC3AP31941 199 aaPredicted RBP9.51□□□□□ -0.89
DDR1-227ENST00000376570 ANAPC16Q96DE5 110 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 NEU1Q99519 415 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 PSMG3Q9BT73 122 aaPredicted RBP9.51□□□□□ -0.89
DDR1-227ENST00000376570 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 CTSZQ9UBR2 303 aa9.51□□□□□ -0.89
DDR1-227ENST00000376570 A8MWP6 167 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 FAM90A26D6RGX4 464 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 AMY1AP04745 511 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 BPIFB3P59826 476 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 TDRG1Q3Y452 100 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 ZNF672Q499Z4 452 aaPredicted RBP9.5□□□□□ -0.89
DDR1-227ENST00000376570 RASL11BQ9BPW5 248 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 COL4A2P08572 1712 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 LOXL3P58215 753 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 ZNF788Q6ZQV5 615 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 UPK2O00526 184 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 IGLV1-44P01699 117 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 PPOXP50336 477 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 TMPRSS3P57727 454 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 WFDC3Q8IUB2 231 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 KCNIP2Q9NS61 270 aa9.5□□□□□ -0.89
DDR1-227ENST00000376570 A0A1W2PN81 502 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 THBDP07204 575 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 MORN5Q5VZ52 161 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 GOLT1AQ6ZVE7 132 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 PGLYRP4Q96LB8 373 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 DUX5Q96PT3 197 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 VPS25Q9BRG1 176 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 MCRIP2Q9BUT9 160 aaKnown RBP9.49□□□□□ -0.89
DDR1-227ENST00000376570 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 J3QW42 95 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 SRIP30626 198 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 Q6ZVH6 145 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 P2RX4Q99571 388 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 AMMECR1Q9Y4X0 333 aaPredicted RBP9.49□□□□□ -0.89
DDR1-227ENST00000376570 LOC389332A0A1B0GUA5 103 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 M0QZ24 198 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 NUPR1O60356 82 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 USF1P22415 310 aaPredicted RBP9.49□□□□□ -0.89
DDR1-227ENST00000376570 KIR2DS2P43631 304 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 BRD3OSQ6XYD6 125 aa9.49□□□□□ -0.89
DDR1-227ENST00000376570 KDF1Q8NAX2 398 aaPredicted RBP9.49□□□□□ -0.89
DDR1-227ENST00000376570 RBM14Q96PK6 669 aaKnown RBP9.49□□□□□ -0.89
DDR1-227ENST00000376570 C20orf202A1L168 122 aa9.48□□□□□ -0.89
DDR1-227ENST00000376570 ZNF785A8K8V0 405 aa9.48□□□□□ -0.89
DDR1-227ENST00000376570 IL4P05112 153 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms