RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ELLP55199 621 aaPredicted RBP8.15□□□□□ -1.1
PDPN-203ENST00000376061 RPL15P61313 204 aaKnown RBP8.15□□□□□ -1.1
PDPN-203ENST00000376061 C15orf32Q32M92 178 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 Q6ZSV7 163 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 ZNF709Q8N972 641 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 VN1R17PQ8TDU5 208 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 PCNPQ8WW12 178 aaKnown RBP8.15□□□□□ -1.1
PDPN-203ENST00000376061 MS4A10Q96PG2 267 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 SERTAD4Q9NUC0 356 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 SLC45A2Q9UMX9 530 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
PDPN-203ENST00000376061 MAST4O15021 2626 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 TCRBV4S1A1TA0A5B7 111 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 FAM223BA6NKX1 122 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 UMAD1C9J7I0 102 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 IGHG4P01861 327 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 NMBP08949 121 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 IGLC1P0CG04 106 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 TPPP2P59282 170 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 SERF2P84101 59 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 RAB31Q13636 194 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 FFAR4Q5NUL3 377 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 AKR1C8PQ5T2L2 129 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 MIC13Q5XKP0 118 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 ZNF329Q86UD4 541 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 FAM223AQ8IWN6 122 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 STPG3Q8N7X2 389 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 JMJD8Q96S16 334 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 TRGV9Q99603 122 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 C21orf62Q9NYP8 219 aa8.14□□□□□ -1.11
PDPN-203ENST00000376061 ZFP92A6NM28 416 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 CLN5O75503 358 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 YIF1AO95070 293 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 IGKV1-17P01599 117 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 IGHV3-23P01764 117 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 LINC00869P0C866 280 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 RPL29P47914 159 aaKnown RBP8.13□□□□□ -1.11
PDPN-203ENST00000376061 FHITP49789 147 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 RAB5CP51148 216 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 MFAP4P55083 255 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 RAB2AP61019 212 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 ZNF90Q03938 601 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 TMEM41BQ5BJD5 291 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 CLLU1Q5K131 121 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 C10orf99Q6UWK7 81 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 LCNL1Q6ZST4 164 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 CYP2G1PQ6ZSU1 146 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 BPIFCQ8NFQ6 507 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 ZNF502Q8TBZ5 544 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 RNF141Q8WVD5 230 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 CXorf58Q96LI9 332 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 KLK15Q9H2R5 256 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 VSIRQ9H7M9 311 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 RPRMQ9NS64 109 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 SLC39A9Q9NUM3 307 aa8.13□□□□□ -1.11
PDPN-203ENST00000376061 TMEM89A2RUT3 159 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 PSMB11A5LHX3 300 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 ZNF705EA8MWA4 302 aaPredicted RBP8.12□□□□□ -1.11
PDPN-203ENST00000376061 TSPAN15O95858 294 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 GATA2P23769 480 aaPredicted RBP8.12□□□□□ -1.11
PDPN-203ENST00000376061 PSMB8P28062 276 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 FCGR2BP31994 310 aaPredicted RBP8.12□□□□□ -1.11
PDPN-203ENST00000376061 NPBWR1P48145 328 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 RAB14P61106 215 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 B2MP61769 119 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 ATP5G2Q06055 141 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 TIGITQ495A1 244 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 Q56UQ5 140 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 GCSAMLQ5JQS6 135 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 Q6ZRG5 221 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 FAM213BQ8TBF2 198 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 LRRC20Q8TCA0 184 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 EEF1AKMT3Q96AZ1 226 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 TXN2Q99757 166 aa8.12□□□□□ -1.11
PDPN-203ENST00000376061 TRBV7-1A0A0A6YYK4 115 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 OR2T8A6NH00 312 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 TCF21O43680 179 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 GNG7O60262 68 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 CRYBA1P05813 215 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 GPR183P32249 361 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 SELENOTP62341 195 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 SLC35B1P78383 322 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 FOXE3Q13461 319 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
PDPN-203ENST00000376061 SAT2Q96F10 170 aaPredicted RBP8.11□□□□□ -1.11
PDPN-203ENST00000376061 RCC1LQ96I51 464 aaKnown RBP8.11□□□□□ -1.11
PDPN-203ENST00000376061 TRAV30A0A087WSZ9 112 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 NDUFA7O95182 113 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 MBP02144 154 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 M6PRP20645 277 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 ADMP35318 185 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 RAB9AP51151 201 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 ZNF616Q08AN1 781 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 ZNF726P1Q15940 193 aa8.1□□□□□ -1.11
PDPN-203ENST00000376061 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms