RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 PDE6HQ13956 83 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 TEX36Q5VZQ5 186 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 LINC00471Q8N535 108 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 C12orf29Q8N999 325 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 OR13D1Q8NGV5 346 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 CMSS1Q9BQ75 279 aaKnown RBP0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 CCDC90BQ9GZT6 254 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 SLC22A13Q9Y226 551 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 C22orf24Q9Y442 160 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 SBF1O95248 1867 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 DENND4CQ5VZ89 1909 aa0.83□□□□□ -2.28
ECHDC1-201ENST00000368287 CLDN25C9JDP6 229 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 C19orf84I3L1E1 186 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 OR1I1O60431 355 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 TCL1BO95988 128 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 SERPINE1P05121 402 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 CTXN2P0C2S0 81 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 BRS3P32247 399 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 SERPINB9P50453 376 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 AP3S2P59780 193 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 DEFB113Q30KQ7 82 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 TMEM97Q5BJF2 176 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 LCA10Q71F78 164 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 S100A7AQ86SG5 101 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 OOSP2Q86WS3 158 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 OR6V1Q8N148 313 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 GPR146Q96CH1 333 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 DGCR14Q96DF8 476 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 SIGMAR1Q99720 223 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 TRIM4Q9C037 500 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 FBXO5Q9UKT4 447 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 OBSL1O75147 1896 aa0.82□□□□□ -2.28
ECHDC1-201ENST00000368287 KIF1BO60333 1816 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 FUOMA2VDF0 154 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 GEMIN2O14893 280 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 LYZL6O75951 148 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 UBL3O95164 117 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 OR4E1P0C645 316 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 S100A4P26447 101 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 CASP1P29466 404 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 RAB4BP61018 213 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 CNBPP62633 177 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 HIST1H3AP68431 136 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 H3F3AP84243 136 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 PHF13Q86YI8 300 aaPredicted RBP0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 OR8D4Q8NGM9 314 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 OR4C6Q8NH72 309 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 ITFG2Q969R8 447 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 OBSCN-AS1Q96MR7 158 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 TAS2R4Q9NYW5 299 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 SNURFQ9Y675 71 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 MED1Q15648 1581 aaPredicted RBP0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 MCM3APO60318 1980 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 MYH10P35580 1976 aa0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 ARHGEF28Q8N1W1 1705 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-201ENST00000368287 TAF1LQ8IZX4 1826 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 E2F6O75461 281 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 C8GP07360 202 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 PPIBP23284 216 aaKnown RBP0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 SPANXN5Q5MJ07 72 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 Q6Q795 121 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 TRAPPC6BQ86SZ2 158 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 FAM19A2Q8N3H0 131 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 TLNRD1Q9H1K6 362 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 MIXL1Q9H2W2 232 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 UTP11Q9Y3A2 253 aaKnown RBP0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
ECHDC1-201ENST00000368287 PCF11O94913 1555 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 A0A087X0T9 212 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 TRBV6-8A0A0A6YYG3 113 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 S100A6P06703 90 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 CYBAP13498 195 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 RNASE4P34096 147 aaKnown RBP0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 PRB3Q04118 309 aaPredicted RBP0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 DEFB115Q30KQ5 88 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 BRMS1LQ5PSV4 323 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 STAG3L4Q8TBR4 150 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 SFT2D1Q8WV19 159 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 C2orf50Q96LR7 162 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 TMEM133Q9H2Q1 129 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 EPDR1Q9UM22 224 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 ZFP30Q9Y2G7 519 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 CASP8AP2Q9UKL3 1982 aa0.79□□□□□ -2.28
ECHDC1-201ENST00000368287 LOC110117498A0A087WWA1 95 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 TRBV6-7A0A0A0MS04 114 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 TRAV12-1A0A0B4J245 112 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 FAM159BA6NKW6 160 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 SULT1B1O43704 296 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 OR2B3O76000 313 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 OR7C1O76099 320 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 IFNA6P05013 189 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 BAALC-AS2P0C853 105 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 YPEL3P61236 119 aaPredicted RBP0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 RHOGP84095 191 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 FADDQ13158 208 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 TSNQ15631 228 aaKnown RBP0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 C3orf56Q8N813 242 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 OR10J5Q8NHC4 309 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 TVP23BQ9NYZ1 205 aa0.78□□□□□ -2.28
ECHDC1-201ENST00000368287 NCOA1Q15788 1441 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms