RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CLDN16Q9Y5I7 305 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 NBL1P41271 181 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 FBLN7Q53RD9 439 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 KLF17Q5JT82 389 aaPredicted RBP15.3■□□□□ 0.04
CLIP2-202ENST00000361545 PRELID3AQ96N28 172 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 SLC50A1Q9BRV3 221 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 OTORQ9NRC9 128 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 HGFACQ04756 655 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 TMEM136Q6ZRR5 245 aa15.3■□□□□ 0.04
CLIP2-202ENST00000361545 CIARTQ8N365 385 aaPredicted RBP15.3■□□□□ 0.04
CLIP2-202ENST00000361545 A0A1B0GUT8 65 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 GCSAMLQ5JQS6 135 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 FBLL1A6NHQ2 334 aaKnown RBP15.29■□□□□ 0.04
CLIP2-202ENST00000361545 ID3Q02535 119 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 MINOS1Q5TGZ0 78 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 TMEM101Q96IK0 257 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 RPP21Q9H633 154 aaKnown RBP15.29■□□□□ 0.04
CLIP2-202ENST00000361545 ZNF581Q9P0T4 197 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 MINOS1-NBL1R4GNA1 71 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 ZNF329Q86UD4 541 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 FER1L6-AS1Q8NA97 138 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 SPATA45Q537H7 98 aa15.29■□□□□ 0.04
CLIP2-202ENST00000361545 SAMD13Q5VXD3 122 aa15.28■□□□□ 0.04
CLIP2-202ENST00000361545 PAPPA-AS1Q5QFB9 102 aa15.28■□□□□ 0.04
CLIP2-202ENST00000361545 LY6G6FQ5SQ64 297 aa15.28■□□□□ 0.04
CLIP2-202ENST00000361545 GTSCR1Q86UQ5 136 aa15.28■□□□□ 0.04
CLIP2-202ENST00000361545 ATG101Q9BSB4 218 aa15.28■□□□□ 0.04
CLIP2-202ENST00000361545 RNASE1P07998 156 aaKnown RBP15.28■□□□□ 0.04
CLIP2-202ENST00000361545 PAX1P15863 534 aa15.28■□□□□ 0.04
CLIP2-202ENST00000361545 SRP19P09132 144 aaKnown RBP15.28■□□□□ 0.04
CLIP2-202ENST00000361545 PSMG4Q5JS54 123 aa15.28■□□□□ 0.04
CLIP2-202ENST00000361545 H0YIZ8 118 aa15.27■□□□□ 0.04
CLIP2-202ENST00000361545 FOLR2P14207 255 aa15.27■□□□□ 0.04
CLIP2-202ENST00000361545 SLC25A16P16260 332 aa15.27■□□□□ 0.04
CLIP2-202ENST00000361545 CDX1P47902 265 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-202ENST00000361545 HINT1P49773 126 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-202ENST00000361545 ATOH7Q8N100 152 aa15.27■□□□□ 0.04
CLIP2-202ENST00000361545 COQ2Q96H96 371 aa15.27■□□□□ 0.04
CLIP2-202ENST00000361545 TMEM42Q69YG0 159 aa15.27■□□□□ 0.04
CLIP2-202ENST00000361545 SLC25A48Q6ZT89 311 aaKnown RBP15.27■□□□□ 0.04
CLIP2-202ENST00000361545 MBNL3Q9NUK0 354 aaKnown RBP15.27■□□□□ 0.04
CLIP2-202ENST00000361545 ZNF256Q9Y2P7 627 aaPredicted RBP15.27■□□□□ 0.04
CLIP2-202ENST00000361545 ZNF257Q9Y2Q1 563 aa15.27■□□□□ 0.04
CLIP2-202ENST00000361545 TRBV9A0A0B4J1U6 114 aa15.27■□□□□ 0.03
CLIP2-202ENST00000361545 TRAV3A0A0B4J244 114 aa15.27■□□□□ 0.03
CLIP2-202ENST00000361545 IMMP2LQ96T52 175 aa15.27■□□□□ 0.03
CLIP2-202ENST00000361545 IL36BQ9NZH7 164 aa15.27■□□□□ 0.03
CLIP2-202ENST00000361545 F11RQ9Y624 299 aaKnown RBP15.27■□□□□ 0.03
CLIP2-202ENST00000361545 KIAA2026Q5HYC2 2103 aa15.27■□□□□ 0.03
CLIP2-202ENST00000361545 BUB1B-PAK6H3BSN5 160 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 M0R1W7 72 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 TMEM170BQ5T4T1 132 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 DTX1Q86Y01 620 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 LINC01356Q8N9X3 169 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 KCNS1Q96KK3 526 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 NAPSAO96009 420 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 LINC00205P59089 165 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 CIRBPQ14011 172 aaKnown RBP15.26■□□□□ 0.03
CLIP2-202ENST00000361545 IGFL3Q6UXB1 125 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 LRTM2Q8N967 370 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 HIST1H4GQ99525 98 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 FABP5P3A8MUU1 101 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 LOC107984156A0A0G2JMH3 177 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 DNLZQ5SXM8 178 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 Q6P435 159 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 ARL17AQ8IVW1 177 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 MPDZO75970 2070 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 RPL15P61313 204 aaKnown RBP15.26■□□□□ 0.03
CLIP2-202ENST00000361545 TMEM160Q9NX00 188 aa15.26■□□□□ 0.03
CLIP2-202ENST00000361545 TRAV5A0A0B4J249 113 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 RNASE7Q9H1E1 156 aaKnown RBP15.25■□□□□ 0.03
CLIP2-202ENST00000361545 DUSP14O95147 198 aaKnown RBP15.25■□□□□ 0.03
CLIP2-202ENST00000361545 PPIFP30405 207 aaKnown RBP15.25■□□□□ 0.03
CLIP2-202ENST00000361545 EFNB3Q15768 340 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 PARD6GQ9BYG4 376 aaPredicted RBP15.25■□□□□ 0.03
CLIP2-202ENST00000361545 TMEM238LA0A1B0GVL6 79 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 A6NJY4 79 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 FAM90A9PA6NNJ1 464 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 PMCHL1Q16048 86 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 Q5PR19 223 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 SIGLEC15Q6ZMC9 328 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 OOSP1A8MZH6 123 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 SRSF7Q16629 238 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLIP2-202ENST00000361545 C5orf64Q2M2E5 130 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 OR5AN1Q8NGI8 311 aa15.25■□□□□ 0.03
CLIP2-202ENST00000361545 SAA4P35542 130 aa15.24■□□□□ 0.03
CLIP2-202ENST00000361545 PROK2Q9HC23 129 aa15.24■□□□□ 0.03
CLIP2-202ENST00000361545 H0YJW9 148 aa15.24■□□□□ 0.03
CLIP2-202ENST00000361545 LEPP41159 167 aa15.24■□□□□ 0.03
CLIP2-202ENST00000361545 SMIM12Q96EX1 92 aa15.24■□□□□ 0.03
CLIP2-202ENST00000361545 EPDR1Q9UM22 224 aa15.24■□□□□ 0.03
CLIP2-202ENST00000361545 TAS2R60P59551 318 aa15.24■□□□□ 0.03
CLIP2-202ENST00000361545 APOHP02749 345 aaPredicted RBP15.24■□□□□ 0.03
CLIP2-202ENST00000361545 HIGD1CA8MV81 97 aa15.23■□□□□ 0.03
CLIP2-202ENST00000361545 LDLRAD4O15165 306 aa15.23■□□□□ 0.03
CLIP2-202ENST00000361545 FAM169BQ8N8A8 192 aa15.23■□□□□ 0.03
CLIP2-202ENST00000361545 TMEM70Q9BUB7 260 aa15.23■□□□□ 0.03
CLIP2-202ENST00000361545 WISP1O95388 367 aa15.23■□□□□ 0.03
CLIP2-202ENST00000361545 ASCL2Q99929 193 aa15.23■□□□□ 0.03
CLIP2-202ENST00000361545 WDR83OSQ9Y284 106 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms