RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 GATA3P23771 443 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 IGHV3-53P01767 116 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 RNF182Q8N6D2 247 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 NEUROG1Q92886 237 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 CCL1P22362 96 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 GFI1BQ5VTD9 330 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 ZNF324BQ6AW86 544 aaPredicted RBP10.72□□□□□ -0.69
NLRC3-202ENST00000359128 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 HIGD1CA8MV81 97 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 INSP01308 110 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 SOD3P08294 240 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 RPL15P61313 204 aaKnown RBP10.72□□□□□ -0.69
NLRC3-202ENST00000359128 MESP1Q9BRJ9 268 aa10.72□□□□□ -0.69
NLRC3-202ENST00000359128 A6NNC1 897 aa10.71□□□□□ -0.69
NLRC3-202ENST00000359128 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.69
NLRC3-202ENST00000359128 IGKV1D-13A0A0B4J2D9 117 aa10.71□□□□□ -0.69
NLRC3-202ENST00000359128 BUB1B-PAK6H3BSN5 160 aa10.71□□□□□ -0.69
NLRC3-202ENST00000359128 MSMBP08118 114 aa10.71□□□□□ -0.69
NLRC3-202ENST00000359128 IGKV1-13P0DP09 117 aa10.71□□□□□ -0.69
NLRC3-202ENST00000359128 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.69
NLRC3-202ENST00000359128 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
NLRC3-202ENST00000359128 RPUSD1Q9UJJ7 312 aaKnown RBP10.71□□□□□ -0.69
NLRC3-202ENST00000359128 NMBP08949 121 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 PYYP10082 97 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 ZNF329Q86UD4 541 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 UBE2E2Q96LR5 201 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 RNF5Q99942 180 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 CYSLTR1Q9Y271 337 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 SRRM5B3KS81 715 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 MST1P26927 711 aa10.71□□□□□ -0.7
NLRC3-202ENST00000359128 LINC00158P58513 81 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 HEPN1Q6WQI6 88 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 MAPK1IP1LQ8NDC0 245 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 EREGO14944 169 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 EVI2AP22794 236 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 SLC25A48Q6ZT89 311 aaKnown RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 C10orf126Q8N4M7 172 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 PAQR4Q8N4S7 273 aaPredicted RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 IGKV2-40A0A087WW87 121 aaPredicted RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 IGKV2D-40P01614 121 aaPredicted RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 NDPQ00604 133 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 PRR30Q53SZ7 412 aaPredicted RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 FAM110DQ8TAY7 271 aaPredicted RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 GAFA1Q96PS6 74 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 CST9LQ9H4G1 147 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 PTPRFP10586 1907 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 GATA4P43694 442 aa10.7□□□□□ -0.7
NLRC3-202ENST00000359128 PUSL1Q8N0Z8 303 aaKnown RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 PEF1Q9UBV8 284 aaKnown RBP10.7□□□□□ -0.7
NLRC3-202ENST00000359128 RPL36AP83881 106 aaKnown RBP10.69□□□□□ -0.7
NLRC3-202ENST00000359128 RPL36ALQ969Q0 106 aaKnown RBP10.69□□□□□ -0.7
NLRC3-202ENST00000359128 TRAV12-3A0A0B4J271 114 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 F2Z2F3 143 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 K7ERU9 68 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 CEACAM8P31997 349 aaPredicted RBP10.69□□□□□ -0.7
NLRC3-202ENST00000359128 FOXG1P55316 489 aaPredicted RBP10.69□□□□□ -0.7
NLRC3-202ENST00000359128 RUSC1-AS1Q66K80 236 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 LCN12Q6JVE5 192 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 LHFPL4Q7Z7J7 247 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 CD177Q8N6Q3 437 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 LTBP1Q14766 1721 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 CRYGSP22914 178 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 SIPA1L1O43166 1804 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 GREB1LQ9C091 1923 aaPredicted RBP10.69□□□□□ -0.7
NLRC3-202ENST00000359128 APOMO95445 188 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 SELLP14151 372 aa10.69□□□□□ -0.7
NLRC3-202ENST00000359128 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
NLRC3-202ENST00000359128 DPRXA6NFQ7 191 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 FCN3O75636 299 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 ORMDL2Q53FV1 153 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 CSRP3P50461 194 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 TMEM155Q4W5P6 130 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 CRIPAKQ8N1N5 446 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 IMMP2LQ96T52 175 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 LINC01619G3V211 115 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 SAA4P35542 130 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 C5orf64Q2M2E5 130 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 RNASE7Q9H1E1 156 aaKnown RBP10.68□□□□□ -0.7
NLRC3-202ENST00000359128 E7EQL1 145 aa10.68□□□□□ -0.7
NLRC3-202ENST00000359128 TRAV9-1A0A075B6T8 112 aa10.67□□□□□ -0.7
NLRC3-202ENST00000359128 CD55P08174 381 aa10.67□□□□□ -0.7
NLRC3-202ENST00000359128 LCTP09848 1927 aa10.67□□□□□ -0.7
NLRC3-202ENST00000359128 LY6HO94772 140 aa10.67□□□□□ -0.7
NLRC3-202ENST00000359128 IGHG3P01860 377 aa10.67□□□□□ -0.7
NLRC3-202ENST00000359128 MCRIP2Q9BUT9 160 aaKnown RBP10.67□□□□□ -0.7
NLRC3-202ENST00000359128 IGKV1-9A0A0C4DH69 117 aa10.67□□□□□ -0.7
NLRC3-202ENST00000359128 PRB4P10163 310 aaPredicted RBP10.67□□□□□ -0.7
NLRC3-202ENST00000359128 TNFSF13O75888 250 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 IGHV4-39P01824 125 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 IFITM3Q01628 133 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 PAX2Q02962 417 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 C17orf82Q86X59 251 aaPredicted RBP10.66□□□□□ -0.7
NLRC3-202ENST00000359128 NABP1Q96AH0 204 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 COQ2Q96H96 371 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
NLRC3-202ENST00000359128 MPTX1A8MV57 137 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 NYNRINQ9P2P1 1898 aaKnown RBP10.66□□□□□ -0.7
NLRC3-202ENST00000359128 PSPNO60542 156 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 LYPD2Q6UXB3 125 aa10.66□□□□□ -0.7
NLRC3-202ENST00000359128 OR5A1Q8NGJ0 315 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms