RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CRYBA4P53673 196 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 TMEM41BQ5BJD5 291 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.21□□□□□ -0.77
GGPS1-202ENST00000358966 CLDND2Q8NHS1 167 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 NEIL1Q96FI4 390 aaPredicted RBP10.21□□□□□ -0.77
GGPS1-202ENST00000358966 HSPB9Q9BQS6 159 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 HEYLQ9NQ87 328 aaPredicted RBP10.21□□□□□ -0.77
GGPS1-202ENST00000358966 TCF19Q9Y242 345 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.21□□□□□ -0.78
GGPS1-202ENST00000358966 PMS2P5A8MQ11 134 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 FAM90A26D6RGX4 464 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 CD24P25063 80 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 ZFP36P26651 326 aaKnown RBP10.21□□□□□ -0.78
GGPS1-202ENST00000358966 CMTM2Q8TAZ6 248 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 RAB1CQ92928 201 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 ST6GALNAC6Q969X2 333 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 TIMD4Q96H15 378 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 CHODLQ9H9P2 273 aa10.21□□□□□ -0.78
GGPS1-202ENST00000358966 HELZ2Q9BYK8 2649 aaKnown RBP10.21□□□□□ -0.78
GGPS1-202ENST00000358966 TRAV26-1A0A087WT03 109 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 PIGBOS1A0A0B4J2F0 54 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 C15orf61A6NNL5 157 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 ENSAO43768 121 aaKnown RBP10.2□□□□□ -0.78
GGPS1-202ENST00000358966 GALR1P47211 349 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 RTL8BQ17RB0 113 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 Q8N7P7 452 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 OR9G1Q8NH87 305 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 NABP2Q9BQ15 211 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 BPESC1Q9GZL8 116 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 CSPG4Q6UVK1 2322 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 ZNF469Q96JG9 3925 aaPredicted RBP10.2□□□□□ -0.78
GGPS1-202ENST00000358966 HMGB3O15347 200 aaKnown RBP10.2□□□□□ -0.78
GGPS1-202ENST00000358966 OR7C2O60412 319 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 CEACAM3P40198 252 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 GPR6P46095 362 aaPredicted RBP10.2□□□□□ -0.78
GGPS1-202ENST00000358966 SUMO1P63165 101 aaKnown RBP10.2□□□□□ -0.78
GGPS1-202ENST00000358966 LCN2P80188 198 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 ZNF843Q8N446 348 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 SSBP3Q9BWW4 388 aaPredicted RBP10.2□□□□□ -0.78
GGPS1-202ENST00000358966 ADIRFQ15847 76 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 OR1N2Q8NGR9 330 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 NEU4Q8WWR8 484 aaPredicted RBP10.2□□□□□ -0.78
GGPS1-202ENST00000358966 OR5B12Q96R08 314 aa10.2□□□□□ -0.78
GGPS1-202ENST00000358966 NAV2Q8IVL1 2488 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 IFNA5P01569 189 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 KIR2DS2P43631 304 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 HBG1P69891 147 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 HBG2P69892 147 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 PAX2Q02962 417 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 MOB3BQ86TA1 216 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 BTF3L4Q96K17 158 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 MANBALQ9NQG1 85 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 TSPOP30536 169 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 VDAC2P45880 294 aaPredicted RBP10.19□□□□□ -0.78
GGPS1-202ENST00000358966 TPPP2P59282 170 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 OR5AN1Q8NGI8 311 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 PATZ1Q9HBE1 687 aaKnown RBP10.19□□□□□ -0.78
GGPS1-202ENST00000358966 TMEM14BQ9NUH8 114 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 ZNF586Q9NXT0 402 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 OR51B2Q9Y5P1 312 aa10.19□□□□□ -0.78
GGPS1-202ENST00000358966 IGLV1-47P01700 117 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 APOA2P02652 100 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 SRSF1Q07955 248 aaKnown RBP eCLIP10.18□□□□□ -0.78
GGPS1-202ENST00000358966 HLA-DRB5Q30154 266 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 AMMECR1LQ6DCA0 310 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 C19orf35Q6ZS72 473 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 OR10P1Q8NGE3 313 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 OR4P4Q8NGL7 312 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 FLYWCH2Q96CP2 140 aaKnown RBP10.18□□□□□ -0.78
GGPS1-202ENST00000358966 ADTRPQ96IZ2 230 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 WDR61Q9GZS3 305 aaKnown RBP10.18□□□□□ -0.78
GGPS1-202ENST00000358966 GNG13Q9P2W3 67 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 APCP25054 2843 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 LOC102723971A0A1B0GUV8 181 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 H7BYZ3 331 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 HRASP01112 189 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 IGKV1D-33P01593 117 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 IGKV1-33P01594 117 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 TMEM144Q7Z5S9 345 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 SCGB1C1Q8TD33 95 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 LHX4Q969G2 390 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 ATP6V0BQ99437 205 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 TLN2Q9Y4G6 2542 aa10.18□□□□□ -0.78
GGPS1-202ENST00000358966 G3V4G9 280 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 IGHV4-39P01824 125 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 LIPFP07098 398 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 RAB9AP51151 201 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 LRRC75BQ2VPJ9 315 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 SP5Q6BEB4 398 aaPredicted RBP10.17□□□□□ -0.78
GGPS1-202ENST00000358966 OR10G4Q8NGN3 311 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 TAF15Q92804 592 aaKnown RBP eCLIP10.17□□□□□ -0.78
GGPS1-202ENST00000358966 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 MRPL27Q9P0M9 148 aaKnown RBP10.17□□□□□ -0.78
GGPS1-202ENST00000358966 CCDC168Q8NDH2 2452 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 GRIFINA4D1Z8 144 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 OR2T8A6NH00 312 aa10.17□□□□□ -0.78
GGPS1-202ENST00000358966 BUB1B-PAK6H3BSN5 160 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms