RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 ZNF808Q8N4W9 903 aaPredicted RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 STPG3Q8N7X2 389 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 ZBTB34Q8NCN2 500 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 OR5A1Q8NGJ0 315 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 VSTM2AQ8TAG5 236 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF799Q96GE5 643 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 NPCDR1Q9BY65 106 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 PRRG4Q9BZD6 226 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 NAV3Q8IVL0 2385 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 NCKAP5O14513 1909 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SVILO95425 2214 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TRAV38-1A0A0B4J264 116 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 IGHV3-20A0A0C4DH32 117 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 hCG_38984A0A1B0GV85 526 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 A0A1W2PNU3 283 aaPredicted RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 IQCF6A8MYZ5 107 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TNFSF11O14788 317 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SNAI2O43623 268 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 RBMXL2O75526 392 aaKnown RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 RHBDL1O75783 438 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 AMY1AP04745 511 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SCTP09683 121 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 REG1BP48304 166 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TCL1AP56279 114 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TFF3Q07654 80 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SRSF6Q13247 344 aaKnown RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 LTC4SQ16873 150 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 RNASEKQ6P5S7 137 aaKnown RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 OR51H1Q8NH63 302 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 LSM10Q969L4 123 aaKnown RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SPATA25Q9BR10 227 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 RTL8AQ9BWD3 113 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 ZNF442Q9H7R0 627 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TNFRSF19Q9NS68 423 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 TECRQ9NZ01 308 aaKnown RBP3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SS18L2Q9UHA2 77 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 PROCRQ9UNN8 238 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SPCS1Q9Y6A9 102 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 LRBAP50851 2863 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 SDK2Q58EX2 2172 aa3.28□□□□□ -1.88
CNGA1-201ENST00000358519 IGKV1-27A0A075B6S5 117 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 KIR2DS1A0A191URI9 304 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 A0A1W2PPM0 123 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 A6NDN8 102 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 ANKRD30BLA7E2S9 258 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 F5H5K5 113 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 SYS1-DBNDD2H3BUS1 97 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 CXCL13O43927 109 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 CLDN14O95500 239 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 IGKV1-39P01597 117 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 IGKV3-15P01624 115 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 IGKV1D-39P04432 117 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 CRYGCP07315 174 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 HIST1H1EP10412 219 aaKnown RBP3.27□□□□□ -1.89
CNGA1-201ENST00000358519 IGFBP2P18065 325 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 CD1BP29016 333 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 KIR2DS4P43632 304 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 CEBPDP49716 269 aaPredicted RBP3.27□□□□□ -1.89
CNGA1-201ENST00000358519 RPL31P62899 125 aaKnown RBP3.27□□□□□ -1.89
CNGA1-201ENST00000358519 FXYD3Q14802 87 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 KIR2DS1Q14954 304 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 GCSAMLQ5JQS6 135 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 SPATA31B1PQ5VZV4 182 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 TMEM14EPQ6UXP3 125 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 C2orf91Q6ZV80 131 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 BPIFA4PQ86YQ2 179 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 OSR2Q8N2R0 312 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 MTURNQ8N3F0 131 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 PPP1R35Q8TAP8 253 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 RAB37Q96AX2 223 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 TXNDC17Q9BRA2 123 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 SRXN1Q9BYN0 137 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 RNASE7Q9H1E1 156 aaKnown RBP3.27□□□□□ -1.89
CNGA1-201ENST00000358519 OR2D2Q9H210 308 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 DEPPQ9NTK1 212 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 IGKV1-12A0A0C4DH73 117 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 A0A1W2PPV4 95 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 FBLL1A6NHQ2 334 aaKnown RBP3.27□□□□□ -1.89
CNGA1-201ENST00000358519 OR11H12B2RN74 326 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 H3BML4 177 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 PDCD6O75340 191 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 IGKV1-5P01602 117 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 IGKV1D-12P01611 117 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 MGST1P10620 155 aaKnown RBP3.27□□□□□ -1.89
CNGA1-201ENST00000358519 CCNOP22674 350 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 GATA3P23771 443 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 HERV-K104P63124 156 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 TMEM249Q2WGJ8 235 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 SLC35E4Q6ICL7 350 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 SHISA6Q6ZSJ9 500 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 OR11H1Q8NG94 326 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 OR11H2Q8NH07 326 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 NEU4Q8WWR8 484 aaPredicted RBP3.27□□□□□ -1.89
CNGA1-201ENST00000358519 MBD6Q96DN6 1003 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 TMEM147Q9BVK8 224 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 TMEM191AQ9H0A3 160 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 FAM234AQ9H0X4 552 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 MS4A6AQ9H2W1 248 aa3.27□□□□□ -1.89
CNGA1-201ENST00000358519 PLEK2Q9NYT0 353 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms