RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 RNF2Q99496 336 aa10.14□□□□□ -0.79
SHANK2-202ENST00000357171 FAM110AQ9BQ89 295 aa10.14□□□□□ -0.79
SHANK2-202ENST00000357171 GINS3Q9BRX5 216 aa10.14□□□□□ -0.79
SHANK2-202ENST00000357171 RHPN1-AS1Q9BWJ2 59 aa10.14□□□□□ -0.79
SHANK2-202ENST00000357171 C20orf85Q9H1P6 137 aa10.14□□□□□ -0.79
SHANK2-202ENST00000357171 BATF3Q9NR55 127 aa10.14□□□□□ -0.79
SHANK2-202ENST00000357171 TBC1D24Q9ULP9 559 aa10.14□□□□□ -0.79
SHANK2-202ENST00000357171 RBMY1BA6NDE4 496 aaKnown RBP10.13□□□□□ -0.79
SHANK2-202ENST00000357171 RBMY1EA6NEQ0 496 aaKnown RBP10.13□□□□□ -0.79
SHANK2-202ENST00000357171 SYNGR2O43760 224 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 MED6O75586 246 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 RBMY1DP0C7P1 496 aaKnown RBP10.13□□□□□ -0.79
SHANK2-202ENST00000357171 CRYBB3P26998 211 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 GPX4P36969 197 aaPredicted RBP10.13□□□□□ -0.79
SHANK2-202ENST00000357171 RND2P52198 227 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 TIGITQ495A1 244 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 OR52B4Q8NGK2 314 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 WWC2-AS2Q96NR7 200 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 WFDC10AQ9H1F0 79 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
SHANK2-202ENST00000357171 PRSS46E5RG02 174 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 SCGB2A1O75556 95 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 APOHP02749 345 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-202ENST00000357171 CD5P06127 495 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 OR10J1P30954 320 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 ASAH1Q13510 395 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 C4orf46Q504U0 113 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 LILRB2Q8N423 598 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 OR4D5Q8NGN0 318 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 NPIPB3Q92617 1050 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 CIB3Q96Q77 187 aaPredicted RBP10.12□□□□□ -0.79
SHANK2-202ENST00000357171 U3KQE9 123 aa10.12□□□□□ -0.79
SHANK2-202ENST00000357171 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 GAMTQ14353 236 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 ODF3L2Q3SX64 289 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 RCHY1Q96PM5 261 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 CITED4Q96RK1 184 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 WDR12Q9GZL7 423 aaKnown RBP10.11□□□□□ -0.79
SHANK2-202ENST00000357171 ZMAT4Q9H898 229 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 SRD5A3Q9H8P0 318 aa10.11□□□□□ -0.79
SHANK2-202ENST00000357171 IGKV1D-37A0A075B6S9 117 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 IGHV3-49A0A0A0MS15 119 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 OR4C46A6NHA9 309 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 UPK1BO75841 260 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 IFNA4P05014 189 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 IAPPP10997 89 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 NPPCP23582 126 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 ZNF846Q147U1 533 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 MAGT1Q9H0U3 335 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 NUDT15Q9NV35 164 aa10.1□□□□□ -0.79
SHANK2-202ENST00000357171 TRAV6A0A075B6T7 132 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 IGHV3OR16-13A0A075B7E8 117 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 IGHV3-74A0A0B4J1X5 117 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 TOMM40O96008 361 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 IFNA21P01568 189 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 BMI1P35226 326 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 RAB11AP62491 216 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 IFITM3Q01628 133 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 Q8WTZ3 238 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 ACY3Q96HD9 319 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 METTL26Q96S19 204 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 SPATA25Q9BR10 227 aa10.09□□□□□ -0.79
SHANK2-202ENST00000357171 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 FAM240BA0A1B0GVZ2 78 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 WRBO00258 174 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 NKX2-1P43699 371 aaPredicted RBP10.08□□□□□ -0.8
SHANK2-202ENST00000357171 PAX9P55771 341 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 POLR2GP62487 172 aaKnown RBP eCLIP10.08□□□□□ -0.8
SHANK2-202ENST00000357171 RPP30P78346 268 aaKnown RBP10.08□□□□□ -0.8
SHANK2-202ENST00000357171 MZT2BQ6NZ67 158 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 TCF24Q7RTU0 167 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 ZNF431Q8TF32 576 aaPredicted RBP10.08□□□□□ -0.8
SHANK2-202ENST00000357171 SMIM8Q96KF7 97 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 LYSTQ99698 3801 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 TMEM231Q9H6L2 316 aa10.08□□□□□ -0.8
SHANK2-202ENST00000357171 IGKV1OR2-108A0A075B7D4 117 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 A0A1W2PS18 150 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 PMS2P5A8MQ11 134 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 DFFBO76075 338 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 RD3LP0DJH9 198 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 PSG1P11464 419 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 USF2Q15853 346 aaPredicted RBP10.07□□□□□ -0.8
SHANK2-202ENST00000357171 THAP8Q8NA92 274 aa10.07□□□□□ -0.8
SHANK2-202ENST00000357171 ZBTB8BQ8NAP8 495 aaPredicted RBP10.07□□□□□ -0.8
SHANK2-202ENST00000357171 DYNC2H1Q8NCM8 4307 aaKnown RBP10.07□□□□□ -0.8
SHANK2-202ENST00000357171 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
SHANK2-202ENST00000357171 IAH1Q2TAA2 248 aaPredicted RBP10.06□□□□□ -0.8
SHANK2-202ENST00000357171 SPANXN5Q5MJ07 72 aa10.06□□□□□ -0.8
SHANK2-202ENST00000357171 C16orf54Q6UWD8 224 aa10.06□□□□□ -0.8
SHANK2-202ENST00000357171 GLMPQ8WWB7 406 aa10.06□□□□□ -0.8
SHANK2-202ENST00000357171 SLC35E1Q96K37 410 aa10.06□□□□□ -0.8
SHANK2-202ENST00000357171 TRGV9Q99603 122 aa10.06□□□□□ -0.8
SHANK2-202ENST00000357171 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
SHANK2-202ENST00000357171 EDA2RQ9HAV5 297 aa10.06□□□□□ -0.8
SHANK2-202ENST00000357171 STRAPQ9Y3F4 350 aaKnown RBP10.06□□□□□ -0.8
SHANK2-202ENST00000357171 LOC102724200A0A096LPH7 203 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-202ENST00000357171 IGHV3-66A0A0C4DH42 116 aa10.05□□□□□ -0.8
SHANK2-202ENST00000357171 BUB3O43684 328 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms