RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 DUX4L9Q6RFH8 374 aaPredicted RBP12.08□□□□□ -0.48
CLCN1-201ENST00000343257 DEFB108BQ8NET1 73 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 GTSF1Q8WW33 167 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 TPPP3Q9BW30 176 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 CXXC4Q9H2H0 198 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
CLCN1-201ENST00000343257 NAV3Q8IVL0 2385 aa12.07□□□□□ -0.48
CLCN1-201ENST00000343257 IGHV3-21A0A0B4J1V1 117 aa12.07□□□□□ -0.48
CLCN1-201ENST00000343257 FBLL1A6NHQ2 334 aaKnown RBP12.07□□□□□ -0.48
CLCN1-201ENST00000343257 OR2J3O76001 311 aa12.07□□□□□ -0.48
CLCN1-201ENST00000343257 TMEM177Q53S58 311 aa12.07□□□□□ -0.48
CLCN1-201ENST00000343257 SPRNQ5BIV9 151 aa12.07□□□□□ -0.48
CLCN1-201ENST00000343257 MOSP00540 346 aa12.07□□□□□ -0.48
CLCN1-201ENST00000343257 LOC400499M0QZD8 3231 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 IGKV1D-17A0A075B6S4 117 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 HLA-DRB1P01911 266 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 APELAP0DMC3 54 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 LOXL3P58215 753 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 PRSS57Q6UWY2 283 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 CNEP1R1Q8N9A8 125 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 OR8A1Q8NGG7 326 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 FOXA2Q9Y261 457 aaPredicted RBP12.06□□□□□ -0.48
CLCN1-201ENST00000343257 FAM90A9PA6NNJ1 464 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 NPIPB3Q92617 1050 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 CALYQ9NYX4 217 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 TRAV8-1A0A0A6YYK1 113 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 TEX50A0A1B0GTY4 177 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 TNFSF15O95150 251 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 C10orf113Q5VZT2 155 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 C2orf91Q6ZV80 131 aa12.06□□□□□ -0.48
CLCN1-201ENST00000343257 LOC389332A0A1B0GUA5 103 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 ZNF207O43670 478 aaKnown RBP12.05□□□□□ -0.48
CLCN1-201ENST00000343257 P01737 135 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 FLYWCH2Q96CP2 140 aaKnown RBP12.05□□□□□ -0.48
CLCN1-201ENST00000343257 JPT1Q9UK76 154 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 CYC1P08574 325 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 REG1BP48304 166 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 RPL24P83731 157 aaKnown RBP12.05□□□□□ -0.48
CLCN1-201ENST00000343257 Q5PR19 223 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 C10orf55Q5SWW7 151 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 PATE2Q6UY27 113 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 C5orf17Q8NAS9 161 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 DDB2Q92466 427 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
CLCN1-201ENST00000343257 ROS1P08922 2347 aa12.05□□□□□ -0.48
CLCN1-201ENST00000343257 MAP1BP46821 2468 aaKnown RBP12.04□□□□□ -0.48
CLCN1-201ENST00000343257 RP1L1Q8IWN7 2480 aaPredicted RBP12.04□□□□□ -0.48
CLCN1-201ENST00000343257 A0A1B0GXF2 115 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 E7EUB6 86 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 RASL11AQ6T310 242 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 RPP21Q9H633 154 aaKnown RBP12.04□□□□□ -0.48
CLCN1-201ENST00000343257 F11RQ9Y624 299 aaKnown RBP12.04□□□□□ -0.48
CLCN1-201ENST00000343257 OR5AL1P0C617 328 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 CXCL12P48061 93 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 MEOX1P50221 254 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 PAX2Q02962 417 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 RAB30Q15771 203 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 RBMXL3Q8N7X1 1067 aaKnown RBP12.04□□□□□ -0.48
CLCN1-201ENST00000343257 APOHP02749 345 aaPredicted RBP12.04□□□□□ -0.48
CLCN1-201ENST00000343257 LIPFP07098 398 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 ACP1P24666 158 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 FAM231DQ6ZW35 169 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 TMEM105Q8N8V8 129 aa12.04□□□□□ -0.48
CLCN1-201ENST00000343257 SMG1Q96Q15 3661 aaKnown RBP12.03□□□□□ -0.48
CLCN1-201ENST00000343257 CRXO43186 299 aaPredicted RBP12.03□□□□□ -0.48
CLCN1-201ENST00000343257 FAM106CPP0CH98 169 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
CLCN1-201ENST00000343257 RTL8BQ17RB0 113 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 FAM106AQ4KMX7 169 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 LINC00305Q7Z4B0 112 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 WFDC3Q8IUB2 231 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 H1FXQ92522 213 aaKnown RBP12.03□□□□□ -0.48
CLCN1-201ENST00000343257 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
CLCN1-201ENST00000343257 RABAC1Q9UI14 185 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 CD69Q07108 199 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 PDPNQ86YL7 162 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 CIARTQ8N365 385 aaPredicted RBP12.03□□□□□ -0.48
CLCN1-201ENST00000343257 OR4A5Q8NH83 315 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 PRR7Q8TB68 274 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 THYN1Q9P016 225 aa12.03□□□□□ -0.48
CLCN1-201ENST00000343257 RPS20P60866 119 aaKnown RBP12.02□□□□□ -0.48
CLCN1-201ENST00000343257 PRCDQ00LT1 54 aa12.02□□□□□ -0.48
CLCN1-201ENST00000343257 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.48
CLCN1-201ENST00000343257 EPDR1Q9UM22 224 aa12.02□□□□□ -0.48
CLCN1-201ENST00000343257 MRPS17Q9Y2R5 130 aaKnown RBP12.02□□□□□ -0.48
CLCN1-201ENST00000343257 NHLH1Q02575 133 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 MOGAT3Q86VF5 341 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 CHCHD1Q96BP2 118 aaKnown RBP12.02□□□□□ -0.49
CLCN1-201ENST00000343257 PERPQ96FX8 193 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 PRNDQ9UKY0 176 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 A8MWL6 223 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 UPK2O00526 184 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
CLCN1-201ENST00000343257 COX8AP10176 69 aa12.02□□□□□ -0.49
CLCN1-201ENST00000343257 MEF2CQ06413 473 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms