RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 INSIG2Q9Y5U4 225 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 C3orf80F5H4A9 247 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 APOHP02749 345 aaPredicted RBP15.06■□□□□ 0
SMPD1-201ENST00000342245 SSR4P51571 173 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 ZNF502Q8TBZ5 544 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 Q8TCH9 128 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 PIFOQ8TCI5 191 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 TMEM14BQ9NUH8 114 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 CEP192Q8TEP8 1941 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 PRUNE2Q8WUY3 3088 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 EML6Q6ZMW3 1958 aa15.06■□□□□ 0
SMPD1-201ENST00000342245 DIDO1Q9BTC0 2240 aaKnown RBP15.06■□□□□ 0
SMPD1-201ENST00000342245 LOC102723996A0A087X1L8 192 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 A0A1W2PRD5 423 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 A0A1W2PRF3 423 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 A0A1W2PRM7 423 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 PSPNO60542 156 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 PPP1R32Q7Z5V6 425 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 TTC9CQ8N5M4 171 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 SMRP1Q8NCR6 262 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 JPT1Q9UK76 154 aa15.05■□□□□ 0
SMPD1-201ENST00000342245 ADAMTS20P59510 1910 aa15.05■□□□□ -0
SMPD1-201ENST00000342245 USF3Q68DE3 2245 aa15.05■□□□□ -0
SMPD1-201ENST00000342245 LINC00205P59089 165 aa15.05■□□□□ -0
SMPD1-201ENST00000342245 DAZAP1Q96EP5 407 aaKnown RBP15.05■□□□□ -0
SMPD1-201ENST00000342245 ZNF714Q96N38 554 aa15.05■□□□□ -0
SMPD1-201ENST00000342245 PAXXQ9BUH6 204 aa15.05■□□□□ -0
SMPD1-201ENST00000342245 MED12LQ86YW9 2145 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 SRRM4A7MD48 611 aaKnown RBP15.04■□□□□ -0
SMPD1-201ENST00000342245 NCR2O95944 276 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 OR1L4Q8NGR5 311 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 MLST8Q9BVC4 326 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 A0A096LPE4 126 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 TRAV3A0A0B4J244 114 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 A0A1B0GW15 77 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 A0A1W2PPZ6 126 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 C19orf71A6NCJ1 209 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 ZNF138P52744 262 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 LCNL1Q6ZST4 164 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 ABCA7Q8IZY2 2146 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 GATD1Q8NB37 220 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 PRR7Q8TB68 274 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 CYSLTR1Q9Y271 337 aa15.04■□□□□ -0
SMPD1-201ENST00000342245 IGKV3D-15A0A087WSY6 115 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 PRR33A8MZF0 331 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 COL8A2P25067 703 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 FAM53AQ6NSI3 398 aaPredicted RBP15.03■□□□□ -0
SMPD1-201ENST00000342245 WDR86Q86TI4 376 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 PRSS3P2Q8NHM4 247 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 PLPPR2Q96GM1 343 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 IGHV1OR15-9A0A0B4J2B8 117 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 KBTBD11-OT1A0A1B0GTJ5 212 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 SCRG1O75711 98 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 FMC1Q96HJ9 113 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 EPDR1Q9UM22 224 aa15.03■□□□□ -0
SMPD1-201ENST00000342245 CD24P25063 80 aa15.02■□□□□ -0
SMPD1-201ENST00000342245 ZNF137PP52743 207 aa15.02■□□□□ -0
SMPD1-201ENST00000342245 WFDC2Q14508 124 aa15.02■□□□□ -0
SMPD1-201ENST00000342245 ASPHD1Q5U4P2 390 aa15.02■□□□□ -0
SMPD1-201ENST00000342245 VKORC1L1Q8N0U8 176 aa15.02■□□□□ -0
SMPD1-201ENST00000342245 COQ2Q96H96 371 aa15.02■□□□□ -0
SMPD1-201ENST00000342245 TIMM8BQ9Y5J9 83 aaPredicted RBP15.02■□□□□ -0
SMPD1-201ENST00000342245 PTPRBP23467 1997 aa15.02□□□□□ -0.01
SMPD1-201ENST00000342245 E9PLD3 99 aa15.02□□□□□ -0.01
SMPD1-201ENST00000342245 CELA3AP09093 270 aa15.02□□□□□ -0.01
SMPD1-201ENST00000342245 YRDCQ86U90 279 aaKnown RBP15.02□□□□□ -0.01
SMPD1-201ENST00000342245 OR5AN1Q8NGI8 311 aa15.02□□□□□ -0.01
SMPD1-201ENST00000342245 IGHV3-9P01782 118 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 MYCNOSP40205 109 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 CYB561P49447 251 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 PCOLCEQ15113 449 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 ZNF766Q5HY98 468 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 PRNDQ9UKY0 176 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 IGKV1OR2-108A0A075B7D4 117 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 A0A1W2PR77 199 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 CSN3P07498 182 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 SPINK2P20155 84 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 TMEM177Q53S58 311 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 C2orf83Q53S99 150 aa15.01□□□□□ -0.01
SMPD1-201ENST00000342245 LAMA1P25391 3075 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 IGHV3-43A0A0B4J1X8 118 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 hADV38S2A0JD32 116 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 IGHV3-43DP0DP04 118 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 SRSF6Q13247 344 aaKnown RBP15□□□□□ -0.01
SMPD1-201ENST00000342245 RIGQ13278 110 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 BCL6BQ8N143 479 aaPredicted RBP15□□□□□ -0.01
SMPD1-201ENST00000342245 OR8A1Q8NGG7 326 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 PHLDA1Q8WV24 401 aaPredicted RBP15□□□□□ -0.01
SMPD1-201ENST00000342245 HCFC1P51610 2035 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 NPIPB6E9PJ23 425 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 PROP1O75360 226 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 GCSHP23434 173 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 SLC25A48Q6ZT89 311 aaKnown RBP15□□□□□ -0.01
SMPD1-201ENST00000342245 C8orf86Q6ZUL3 223 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 CACNG8Q8WXS5 425 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 ERG28Q9UKR5 140 aa15□□□□□ -0.01
SMPD1-201ENST00000342245 TET2Q6N021 2002 aaPredicted RBP14.99□□□□□ -0.01
SMPD1-201ENST00000342245 DEFB108AA8MXU0 73 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 COX7A2P2O60397 106 aa14.99□□□□□ -0.01
SMPD1-201ENST00000342245 CEBPDP49716 269 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms