RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
TNC-201ENST00000341037 SLC25A20O43772 301 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 WFDC1Q9HC57 220 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 A0A1B0GV72 72 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 RNF126Q9BV68 326 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 A0A0G2JNJ9 132 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 NDPQ00604 133 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 SRSF1Q07955 248 aaKnown RBP eCLIP9.42□□□□□ -0.9
TNC-201ENST00000341037 GGNQ86UU5 652 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 NR2C2APQ86WQ0 139 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 Q9UFV3 132 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 IGKV1D-8A0A087WSZ0 117 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 SERF1AO75920 110 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 Q0VFX4 171 aa9.42□□□□□ -0.9
TNC-201ENST00000341037 MBNL3Q9NUK0 354 aaKnown RBP9.42□□□□□ -0.9
TNC-201ENST00000341037 CCL1P22362 96 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 C10orf55Q5SWW7 151 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 NXT2Q9NPJ8 142 aaKnown RBP9.41□□□□□ -0.9
TNC-201ENST00000341037 IGLV3-32A0A0A0MS00 114 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 CA1P00915 261 aaPredicted RBP9.41□□□□□ -0.9
TNC-201ENST00000341037 IGHV3-53P01767 116 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 EFNB3Q15768 340 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 LINC00518Q8N0U6 118 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
TNC-201ENST00000341037 TRPM7Q96QT4 1865 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 PAX2Q02962 417 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 ASCL4Q6XD76 172 aa9.41□□□□□ -0.9
TNC-201ENST00000341037 DSCR9P59020 149 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 FAM169BQ8N8A8 192 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 RCHY1Q96PM5 261 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 CCL20P78556 96 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 TPTE2P1Q5T6R2 138 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 SPATA31B1PQ5VZV4 182 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 IGHV1-3A0A0C4DH29 117 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 NPIPB5A8MRT5 1133 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 BTCP35070 178 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 EFNA4P52798 201 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 CD177Q8N6Q3 437 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 SPCS1Q9Y6A9 102 aa9.4□□□□□ -0.9
TNC-201ENST00000341037 FAM166AQ6J272 317 aa9.4□□□□□ -0.91
TNC-201ENST00000341037 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 EXOC3-AS1Q8N2X6 119 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 SCRT1Q9BWW7 348 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 TMEM178BH3BS89 294 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 EFNA2O43921 213 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 TIMP3P35625 211 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 DTX2Q86UW9 622 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 OVOL1O14753 267 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 TDGF1P3P51864 188 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 ACTL10Q5JWF8 245 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 PHLDA1Q8WV24 401 aaPredicted RBP9.39□□□□□ -0.91
TNC-201ENST00000341037 GFI1Q99684 422 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 NRN1Q9NPD7 142 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 PLSCR4Q9NRQ2 329 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 A0A087WWC5 75 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 CYSLTR1Q9Y271 337 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 ARID1AO14497 2285 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 H3BUX3 64 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 LINC00158P58513 81 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 PRADC1Q9BSG0 188 aa9.39□□□□□ -0.91
TNC-201ENST00000341037 SPTBP11277 2137 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 THADAQ6YHU6 1953 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 IGKV1-27A0A075B6S5 117 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 DPM2O94777 84 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 CRYGSP22914 178 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
TNC-201ENST00000341037 UNQ6494/PRO21346Q6UXR6 183 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 C5orf24Q7Z6I8 188 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 BRWD1Q9NSI6 2320 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 PMS2P5A8MQ11 134 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 H3BUT2 72 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 FOXL1Q12952 345 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 OCC1Q8TAD7 63 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 TRAV3A0A0B4J244 114 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 HBDP02042 147 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 NABP1Q96AH0 204 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 NHP2Q9NX24 153 aaKnown RBP9.38□□□□□ -0.91
TNC-201ENST00000341037 IGFL4Q6B9Z1 124 aa9.38□□□□□ -0.91
TNC-201ENST00000341037 FNDC4Q9H6D8 234 aaPredicted RBP9.38□□□□□ -0.91
TNC-201ENST00000341037 IGKCP01834 107 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 ZNF474Q6S9Z5 364 aaPredicted RBP9.37□□□□□ -0.91
TNC-201ENST00000341037 TRGV1A0A0A0MS02 117 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 C19orf67A6NJJ6 358 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 LILRA1O75019 489 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 LY6HO94772 140 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 NCR2O95944 276 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 ATRAIDQ6UW56 229 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 SLC25A15Q9Y619 301 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 DMRTA1Q5VZB9 504 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 NIT1Q86X76 327 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 KLHL30-AS1Q8NEE0 82 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
TNC-201ENST00000341037 HEATR5BQ9P2D3 2071 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 TMEM8BA6NDV4 472 aa9.37□□□□□ -0.91
TNC-201ENST00000341037 J3QRE1 110 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms