RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 LSM6P62312 80 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM187Q14656 261 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 COX20Q5RI15 118 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 CLEC19AQ6UXS0 136 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 IL17RELQ6ZVW7 336 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 SPEM1Q8N4L4 309 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 THAP8Q8NA92 274 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 MUCL1Q96DR8 90 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 CSDC2Q9Y534 153 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 A0A0U1RRA0 63 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 SYS1-DBNDD2H3BUS1 97 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 WNT9BO14905 357 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ITGB4P16144 1822 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 M0QXV9 152 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 EDN1P05305 212 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 CEACAM5P06731 702 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZXDCQ2QGD7 858 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 APCDD1LQ8NCL9 501 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF689Q96CS4 500 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 MARF1Q9Y4F3 1742 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZG16O60844 167 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 PAX1P15863 534 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ID3Q02535 119 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 SLC25A48Q6ZT89 311 aaKnown RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 C1orf159Q96HA4 380 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 KLK11Q9UBX7 282 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRAV1-1A0A0B4J248 108 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRSS37A4D1T9 235 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 SSR4P51571 173 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 PSG4Q00888 419 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 Q0VG73 95 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 LAGE3Q14657 143 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 FOXI2Q6ZQN5 318 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 STPG4Q8N801 248 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 IL25Q9H293 177 aa5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF703Q9H7S9 590 aaPredicted RBP5.13□□□□□ -1.59
CDC42BPA-201ENST00000334218 A0A1W2PPV9 198 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 CRYGSP22914 178 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 Q96M85 177 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 CXCL16Q9H2A7 254 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 LSM4Q9Y4Z0 139 aaKnown RBP5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 HILPDAQ9Y5L2 63 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 PLXNB2O15031 1838 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 MPV17P39210 176 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM159AQ6UWV7 190 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 LINC00527Q9UJ94 153 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 IGKV6-21A0A0C4DH24 114 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 WNT1P04628 370 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 HERVK_113P63121 156 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 GUSBP1Q15486 140 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 C12orf76Q8N812 135 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 RGPD5Q99666 1765 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 PIRTP0C851 137 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 CECR9P0C854 216 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 CXCL2P19875 107 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 BVES-AS1Q5T3Y7 98 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 NRAPQ86VF7 1730 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 C2CD4BA6NLJ0 364 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 TIAF1O95411 115 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 SIPA1L3O60292 1781 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 MYMXA0A1B0GTQ4 84 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 COLCA2A8K830 154 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRGV9Q99603 122 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 H3BT86 120 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 GYPBP06028 91 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 IL6RP08887 468 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 FOXA1P55317 472 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 LOXL3P58215 753 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 IGHV3OR15-7A0A075B7D8 119 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMEM202A6NGA9 273 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 C8orf88P0DMB2 117 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 CEACAM8P31997 349 aaPredicted RBP5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 RRN3P1Q2M238 152 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 TXNDC8Q6A555 127 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 Q6ZS49 121 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 DEFB125Q8N687 156 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF488Q96MN9 340 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 JPT2Q9H910 190 aa5.12□□□□□ -1.59
CDC42BPA-201ENST00000334218 TSC2P49815 1807 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRAV12-2A0A075B6T6 113 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 FAM78AQ5JUQ0 283 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 KLF2Q9Y5W3 355 aaPredicted RBP5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 ALPK3Q96L96 1907 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 UBR2Q8IWV8 1755 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 ZNF138P52744 262 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 FOXC1Q12948 553 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 ASCL5Q7RTU5 278 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 MYEOVQ96EZ4 313 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 RHODO00212 210 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 PFN4Q8NHR9 129 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 RNF185Q96GF1 192 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 SDF2L1Q9HCN8 221 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 KDM3BQ7LBC6 1761 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 TRBV4-1A0A0J9YWV2 114 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 PRSS29PA6NIE9 313 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 TMPRSS2O15393 492 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 CEND1Q8N111 149 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 PLXNA1Q9UIW2 1896 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 F8VVB4 439 aa5.11□□□□□ -1.59
CDC42BPA-201ENST00000334218 F8VWA3 439 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms