RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 PRRX1P54821 245 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 KCNIP4Q6PIL6 250 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 TMEM144Q7Z5S9 345 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 MS4A10Q96PG2 267 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 DNAJC4Q9NNZ3 241 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 TECRQ9NZ01 308 aaKnown RBP8.55□□□□□ -1.04
CUL4A-201ENST00000326335 SLC45A2Q9UMX9 530 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 CHD6Q8TD26 2715 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 F2Z2F3 143 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 MFAP2P55001 183 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 ECSCRQ19T08 205 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 BCL6BQ8N143 479 aaPredicted RBP8.55□□□□□ -1.04
CUL4A-201ENST00000326335 OR5AN1Q8NGI8 311 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 TMEM186Q96B77 213 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 LSM4Q9Y4Z0 139 aaKnown RBP8.55□□□□□ -1.04
CUL4A-201ENST00000326335 IGKV3-7A0A075B6H7 116 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 TMSB15BA0A087X1C1 80 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 PGPA6NDG6 321 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 C19orf84I3L1E1 186 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 ZNF207O43670 478 aaKnown RBP8.55□□□□□ -1.04
CUL4A-201ENST00000326335 SCGB1D1O95968 90 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 IGHV2-5P01817 119 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 MEF2CQ06413 473 aaPredicted RBP8.55□□□□□ -1.04
CUL4A-201ENST00000326335 PPP1R27Q86WC6 154 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 TMEM219Q86XT9 240 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 C11orf42Q8N5U0 333 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 OR5B3Q8NH48 314 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 SRSF12Q8WXF0 261 aaKnown RBP8.55□□□□□ -1.04
CUL4A-201ENST00000326335 FAM168AQ92567 244 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 DIRC2Q96SL1 478 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
CUL4A-201ENST00000326335 SNURFLB1AK76 121 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 BUB1B-PAK6H3BSN5 160 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 PDE6DO43924 150 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 ZNF137PP52743 207 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 CR1LQ2VPA4 569 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 TIGITQ495A1 244 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 EXOC3-AS1Q8N2X6 119 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 SSBP4Q9BWG4 385 aaPredicted RBP8.54□□□□□ -1.04
CUL4A-201ENST00000326335 MPDU1O75352 247 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 PFN1P07737 140 aaKnown RBP8.54□□□□□ -1.04
CUL4A-201ENST00000326335 NTF3P20783 257 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 GPR6P46095 362 aaPredicted RBP8.54□□□□□ -1.04
CUL4A-201ENST00000326335 RAB1CQ92928 201 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 ZNF503Q96F45 646 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 WNT10AQ9GZT5 417 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 GNB4Q9HAV0 340 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 FKBP11Q9NYL4 201 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 LOC105371242A0A075B767 164 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 A0A087WWC5 75 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 ZNF705FA8MVS1 300 aaPredicted RBP8.54□□□□□ -1.04
CUL4A-201ENST00000326335 NUPR1O60356 82 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 ZNF705DP0CH99 300 aaPredicted RBP8.54□□□□□ -1.04
CUL4A-201ENST00000326335 ZNF705BP0CI00 300 aaPredicted RBP8.54□□□□□ -1.04
CUL4A-201ENST00000326335 GZMBP10144 247 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 SUB1P53999 127 aaKnown RBP eCLIP8.54□□□□□ -1.045e-8■■■■■ 59
CUL4A-201ENST00000326335 BRD3OSQ6XYD6 125 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 BAGE2Q86Y30 109 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.54□□□□□ -1.04
CUL4A-201ENST00000326335 OR52E5Q8NH55 327 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 TMUB1Q9BVT8 246 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 KCNIP2Q9NS61 270 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 BET1LQ9NYM9 111 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 NAT8BQ9UHF3 227 aa8.54□□□□□ -1.04
CUL4A-201ENST00000326335 JMJD1CQ15652 2540 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 HECTD1Q9ULT8 2610 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 B4DEV8 164 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 H0Y8G0 127 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 CORTO00230 105 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 C8orf88P0DMB2 117 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 FOLR2P14207 255 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 HOXA5P20719 270 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 HTR1DP28221 377 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 CDX1P47902 265 aaPredicted RBP8.53□□□□□ -1.04
CUL4A-201ENST00000326335 VWC2Q2TAL6 325 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 C17orf77Q96MU5 243 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 SOX21Q9Y651 276 aaPredicted RBP8.53□□□□□ -1.04
CUL4A-201ENST00000326335 ISLRO14498 428 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 TEX38Q6PEX7 206 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 OR1L6Q8NGR2 347 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 VSTM2AQ8TAG5 236 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 JKAMPQ9P055 326 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 SIGLEC9Q9Y336 463 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 A0A1B0GWJ7 208 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 IGLV2-23P01705 113 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 PMCHP20382 165 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 RPL29P47914 159 aaKnown RBP8.53□□□□□ -1.04
CUL4A-201ENST00000326335 SP5Q6BEB4 398 aaPredicted RBP8.53□□□□□ -1.04
CUL4A-201ENST00000326335 PATE2Q6UY27 113 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 CORO2AQ92828 525 aa8.53□□□□□ -1.04
CUL4A-201ENST00000326335 AMMECR1Q9Y4X0 333 aaPredicted RBP8.53□□□□□ -1.04
CUL4A-201ENST00000326335 LIPFP07098 398 aa8.52□□□□□ -1.05
CUL4A-201ENST00000326335 ZFP36P26651 326 aaKnown RBP8.52□□□□□ -1.05
CUL4A-201ENST00000326335 ADMP35318 185 aa8.52□□□□□ -1.05
CUL4A-201ENST00000326335 TAS2R45P59539 299 aa8.52□□□□□ -1.05
CUL4A-201ENST00000326335 UBE2G1P62253 170 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms